RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 FAM95CA0A1B0GW59 222 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 A0A1W2PQM1 296 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 CSO75390 466 aaKnown RBP13.4□□□□□ -0.26
SSR4-202ENST00000370085 CATP04040 527 aaKnown RBP13.4□□□□□ -0.26
SSR4-202ENST00000370085 MPC1LP0DKB6 136 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 TYRP1P17643 537 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 SAT1P21673 171 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 MAP4P27816 1152 aaKnown RBP13.4□□□□□ -0.26
SSR4-202ENST00000370085 GABRB3P28472 473 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 SHMT2P34897 504 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 CAPZBP47756 277 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 PMS2P54278 862 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 IL2P60568 153 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 POU4F1Q01851 419 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 EIF3IQ13347 325 aaKnown RBP13.4□□□□□ -0.26
SSR4-202ENST00000370085 PHF19Q5T6S3 580 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 NKAIN2Q5VXU1 208 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 DUS1LQ6P1R4 473 aaKnown RBP13.4□□□□□ -0.26
SSR4-202ENST00000370085 TMEM71Q6P5X7 295 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 XKR5Q6UX68 686 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 MYO1HQ8N1T3 1032 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 OR5AR1Q8NGP9 310 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 CD200R1Q8TD46 325 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 RAD51AP1Q96B01 352 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 RBBP8Q99708 897 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 CCDC77Q9BR77 488 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 SCNM1Q9BWG6 230 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 TFB2MQ9H5Q4 396 aaKnown RBP13.4□□□□□ -0.26
SSR4-202ENST00000370085 ACSS3Q9H6R3 686 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 SYTL2Q9HCH5 934 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 SLC17A6Q9P2U8 582 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 SLC39A10Q9ULF5 831 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 PSAT1Q9Y617 370 aa13.4□□□□□ -0.26
SSR4-202ENST00000370085 ZNF839A8K0R7 811 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 MAP3K7O43318 606 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 ZBTB14O43829 449 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 INHBAP08476 426 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 F7P08709 466 aaPredicted RBP13.39□□□□□ -0.27
SSR4-202ENST00000370085 CCKBRP32239 447 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 LIMK2P53671 638 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 SHC2P98077 582 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 TARDBPQ13148 414 aaKnown RBP eCLIP13.39□□□□□ -0.27
SSR4-202ENST00000370085 PRKG2Q13237 762 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 GBX1Q14549 363 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 UAP1Q16222 522 aaPredicted RBP13.39□□□□□ -0.27
SSR4-202ENST00000370085 ISXQ2M1V0 245 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 ACSBG2Q5FVE4 666 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 RBM20Q5T481 1227 aaKnown RBP13.39□□□□□ -0.27
SSR4-202ENST00000370085 AMIGO1Q86WK6 493 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 VRK3Q8IV63 474 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 NKAPQ8N5F7 415 aaKnown RBP13.39□□□□□ -0.27
SSR4-202ENST00000370085 OR4E2Q8NGC2 313 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 OR52E1Q8NGJ3 308 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 CD180Q99467 661 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 CMKLR1Q99788 373 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 NUDT22Q9BRQ3 303 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 RAB33BQ9H082 229 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 RDH14Q9HBH5 336 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 POPDC3Q9HBV1 291 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 HRASLS2Q9NWW9 162 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 OR6C2Q9NZP2 312 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 EPHA6Q9UF33 1036 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 LNPEPQ9UIQ6 1025 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 ATXN7L1Q9ULK2 861 aaPredicted RBP13.39□□□□□ -0.27
SSR4-202ENST00000370085 MSRB2Q9Y3D2 182 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 CEP295Q9C0D2 2601 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 NCOR2Q9Y618 2525 aa13.39□□□□□ -0.27
SSR4-202ENST00000370085 OR6C74A6NCV1 312 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 OR5K3A6NET4 321 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 CXorf49A8MYA2 514 aaPredicted RBP13.38□□□□□ -0.27
SSR4-202ENST00000370085 HGSO14964 777 aaPredicted RBP13.38□□□□□ -0.27
SSR4-202ENST00000370085 TOX3O15405 576 aaPredicted RBP13.38□□□□□ -0.27
SSR4-202ENST00000370085 RASSF9O75901 435 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 MATN4O95460 622 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 C8GP07360 202 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 ABHD2P08910 425 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 STMN1P16949 149 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 CYP2A7P20853 494 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 FDXRP22570 491 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 CSTF2P33240 577 aaKnown RBP eCLIP13.38□□□□□ -0.27
SSR4-202ENST00000370085 HSD17B2P37059 387 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 ABCG1P45844 678 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 RAB28P51157 221 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 CDKN2DP55273 166 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 USP10Q14694 798 aaKnown RBP13.38□□□□□ -0.27
SSR4-202ENST00000370085 LGSNQ5TDP6 509 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 IRGCQ6NXR0 463 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 CYB5D1Q6P9G0 228 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 CCNI2Q6ZMN8 369 aaPredicted RBP13.38□□□□□ -0.27
SSR4-202ENST00000370085 CCDC91Q7Z6B0 441 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 CPNE9Q8IYJ1 553 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 SLC22A18Q96BI1 424 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 LIN37Q96GY3 246 aaPredicted RBP13.38□□□□□ -0.27
SSR4-202ENST00000370085 FUT8Q9BYC5 575 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 TRIM54Q9BYV2 358 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 ANKZF1Q9H8Y5 726 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 SMYD2Q9NRG4 433 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 TSR3Q9UJK0 312 aaKnown RBP13.38□□□□□ -0.27
SSR4-202ENST00000370085 MED16Q9Y2X0 877 aa13.38□□□□□ -0.27
SSR4-202ENST00000370085 ENTPD2Q9Y5L3 495 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms