RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CNBD2Q96M20 576 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 TSGA13Q96PP4 275 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 TM9SF2Q99805 663 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 CXorf21Q9HAI6 301 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 LRRC4Q9HBW1 653 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 C8orf4Q9NR00 106 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 GPATCH2LQ9NWQ4 482 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 MARCH2Q9P0N8 246 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 RCOR3Q9P2K3 495 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 ZFHX3Q15911 3703 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 A0A1W2PNU3 283 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 PDPK1O15530 556 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 KDELR3O43731 214 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 CST8O60676 142 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 RNASEH2AO75792 299 aaKnown RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 ICAM2P13598 275 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 HOXB3P14651 431 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 OR3A3P47888 321 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 DGKEP52429 567 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 MLLT10P55197 1068 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 CDH4P55283 916 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 ZBTB16Q05516 673 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 PIGHQ14442 188 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 ADGRD1Q6QNK2 874 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 SPATC1Q76KD6 591 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 ZNF438Q7Z4V0 828 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 KDF1Q8NAX2 398 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 TP53I13Q8NBR0 393 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 MRPS31Q92665 395 aaKnown RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 KCTD15Q96SI1 283 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 VPS37BQ9H9H4 285 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 HMG20AQ9NP66 347 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 CDC14AQ9UNH5 594 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 ERVW-1Q9UQF0 538 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 POLHQ9Y253 713 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 CACNA1EQ15878 2313 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 F5H423 210 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 TXNDC9O14530 226 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 SULT1B1O43704 296 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 DNAJB5O75953 348 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 ALDH1A2O94788 518 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 SEC24DO94855 1032 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 JUNP05412 331 aaKnown RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 MYL2P10916 166 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 SDC4P31431 198 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 ADRA1BP35368 520 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 POLD2P49005 469 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 GPS1Q13098 491 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 VEPH1Q14D04 833 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 IYDQ6PHW0 289 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 RAB44Q7Z6P3 723 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 SNX31Q8N9S9 440 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 TTC16Q8NEE8 873 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 OR7D4Q8NG98 312 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 CAPSLQ8WWF8 208 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 RNF34Q969K3 372 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 C9orf72Q96LT7 481 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 DACH2Q96NX9 599 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 TRIM15Q9C019 465 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 EIF3KQ9UBQ5 218 aaKnown RBP6.75□□□□□ -1.33
CSDE1-204ENST00000369530 KIAA1549Q9HCM3 1950 aa6.75□□□□□ -1.33
CSDE1-204ENST00000369530 A0A1W2PPW3 197 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 PAGE1O75459 146 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 GMNNO75496 209 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 UGT2B10P36537 528 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 GCGRP47871 477 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 POLR2GP62487 172 aaKnown RBP eCLIP6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ITGADQ13349 1161 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 SERINC3Q13530 473 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 PLEKHG6Q3KR16 790 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 GRAMD1BQ3KR37 738 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 AASDHQ4L235 1098 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-204ENST00000369530 NHSL2Q5HYW2 709 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 C6orf52Q5T4I8 152 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 TSSK4Q6SA08 328 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 PCGF5Q86SE9 256 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ARMC8Q8IUR7 673 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 LILRA2Q8N149 483 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 PIK3C3Q8NEB9 887 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 RAB2BQ8WUD1 216 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 PDXPQ96GD0 296 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 PWWP2AQ96N64 755 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 SLITRK1Q96PX8 696 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 MGME1Q9BQP7 344 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ANKHQ9HCJ1 492 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 PSMC3IPQ9P2W1 217 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-204ENST00000369530 MUC6Q6W4X9 2439 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 C7orf72A4D263 438 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 E9PAM4 449 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 POC1B-GALNT4F8VUJ3 575 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 J3QRK9 145 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 KLHL41O60662 606 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ADH1CP00326 375 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 RPS17P08708 135 aaKnown RBP6.74□□□□□ -1.33
CSDE1-204ENST00000369530 KRT7P08729 469 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 PCNAP12004 261 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 ALDH18A1P54886 795 aaKnown RBP6.74□□□□□ -1.33
CSDE1-204ENST00000369530 SNX16P57768 344 aa6.74□□□□□ -1.33
CSDE1-204ENST00000369530 PFN3P60673 137 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms