RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 EDEM2Q9BV94 578 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 POFUT1Q9H488 388 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 TMEM9BQ9NQ34 198 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 SLC17A7Q9P2U7 560 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 ERVW-1Q9UQF0 538 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 LRCH1Q9Y2L9 728 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 WASH3PC4AMC7 463 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 KPNA5O15131 536 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 PFDN6O15212 129 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 ATG13O75143 517 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 POP4O95707 220 aaKnown RBP8.65□□□□□ -1.03
TPM3-213ENST00000368545 GOT2P00505 430 aaKnown RBP8.65□□□□□ -1.03
TPM3-213ENST00000368545 PIRTP0C851 137 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 DRD4P21917 467 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 FCARP24071 287 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 NFKBIAP25963 317 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 MPP1Q00013 466 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 FCHO2Q0JRZ9 810 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 DLG2Q15700 870 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 MYLK3Q32MK0 819 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 CCDC153Q494R4 210 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 ACCSLQ4AC99 568 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 CARD16Q5EG05 197 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 TRIM68Q6AZZ1 485 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 PTAR1Q7Z6K3 402 aaPredicted RBP8.65□□□□□ -1.03
TPM3-213ENST00000368545 SDCCAG8Q86SQ7 713 aaPredicted RBP8.65□□□□□ -1.03
TPM3-213ENST00000368545 CAMK1DQ8IU85 385 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 RYBPQ8N488 228 aaPredicted RBP8.65□□□□□ -1.03
TPM3-213ENST00000368545 OR13C4Q8NGS5 318 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 OR4L1Q8NH43 312 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 RAB3IL1Q8TBN0 382 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 PIH1D2Q8WWB5 315 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 GRAMD1AQ96CP6 724 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 ATXN7L3BQ96GX2 97 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 TSNARE1Q96NA8 513 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 FAM83CQ9BQN1 747 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 C8orf33Q9H7E9 229 aaPredicted RBP8.65□□□□□ -1.03
TPM3-213ENST00000368545 INTS10Q9NVR2 710 aaKnown RBP8.65□□□□□ -1.03
TPM3-213ENST00000368545 HECAQ9UBI9 543 aaPredicted RBP8.65□□□□□ -1.03
TPM3-213ENST00000368545 MTO1Q9Y2Z2 717 aaKnown RBP8.65□□□□□ -1.03
TPM3-213ENST00000368545 PKP3Q9Y446 797 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 ZNF711Q9Y462 761 aa8.65□□□□□ -1.03
TPM3-213ENST00000368545 MUC22E2RYF6 1773 aaPredicted RBP8.65□□□□□ -1.03
TPM3-213ENST00000368545 A0A096LPK6 155 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 A0A0J9YYE9 177 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 TCP11X1B4DZS4 312 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 STX7O15400 261 aaKnown RBP8.64□□□□□ -1.03
TPM3-213ENST00000368545 CD3EAPO15446 510 aaKnown RBP8.64□□□□□ -1.03
TPM3-213ENST00000368545 PIGNO95427 931 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 TRBC1P01850 177 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 DLDP09622 509 aaKnown RBP8.64□□□□□ -1.03
TPM3-213ENST00000368545 CISD3P0C7P0 127 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 STMN1P16949 149 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 TNFSF4P23510 183 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 GABRB3P28472 473 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 CRABP2P29373 138 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 HMGCLP35914 325 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 CSRP3P50461 194 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 CCNHP51946 323 aaPredicted RBP8.64□□□□□ -1.03
TPM3-213ENST00000368545 KPNA2P52292 529 aaKnown RBP8.64□□□□□ -1.03
TPM3-213ENST00000368545 SLC12A2P55011 1212 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 USP10Q14694 798 aaKnown RBP8.64□□□□□ -1.03
TPM3-213ENST00000368545 EIF4HQ15056 248 aaKnown RBP8.64□□□□□ -1.03
TPM3-213ENST00000368545 PDCD2Q16342 344 aaPredicted RBP8.64□□□□□ -1.03
TPM3-213ENST00000368545 ZSCAN26Q16670 478 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 GEN1Q17RS7 908 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 TYSND1Q2T9J0 566 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 PREPLQ4J6C6 727 aaPredicted RBP8.64□□□□□ -1.03
TPM3-213ENST00000368545 AARS2Q5JTZ9 985 aaKnown RBP8.64□□□□□ -1.03
TPM3-213ENST00000368545 GKAP1Q5VSY0 366 aaPredicted RBP8.64□□□□□ -1.03
TPM3-213ENST00000368545 MBNL2Q5VZF2 373 aaKnown RBP8.64□□□□□ -1.03
TPM3-213ENST00000368545 CYP2R1Q6VVX0 501 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 CDHR3Q6ZTQ4 885 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 MFSD6LQ8IWD5 586 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 YAF2Q8IY57 180 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 LRRC34Q8IZ02 419 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 KDM1BQ8NB78 822 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 OR4K2Q8NGD2 314 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 OR6K2Q8NGY2 324 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 LRTOMTQ8WZ04 291 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 ECHDC3Q96DC8 303 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 TSPAN17Q96FV3 270 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 CDKN2AIPNLQ96HQ2 116 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 TBATAQ96M53 351 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 LYSMD1Q96S90 227 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 FAM107BQ9H098 131 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 EPB41L1Q9H4G0 881 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 ECT2Q9H8V3 914 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.64□□□□□ -1.03
TPM3-213ENST00000368545 MID2Q9UJV3 735 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 TLK1Q9UKI8 766 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 SLC39A10Q9ULF5 831 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 KCTD3Q9Y597 815 aa8.64□□□□□ -1.03
TPM3-213ENST00000368545 EP300Q09472 2414 aaPredicted RBP8.63□□□□□ -1.03
TPM3-213ENST00000368545 A0A087X1B8 175 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 PRSS38A1L453 326 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 CCDC162PA2VCL2 907 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 KLF11O14901 512 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 BIRC5O15392 142 aa8.63□□□□□ -1.03
TPM3-213ENST00000368545 TULP3O75386 442 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms