RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 LRRC57Q8N9N7 239 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 GALNT11Q8NCW6 608 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 STYXQ8WUJ0 223 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 DPH2Q9BQC3 489 aaPredicted RBP15.52■□□□□ 0.08
CKS1B-202ENST00000368436 LACRTQ9GZZ8 138 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 ACTR10Q9NZ32 417 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 USP9YO00507 2555 aaPredicted RBP15.52■□□□□ 0.07
CKS1B-202ENST00000368436 USP9XQ93008 2570 aaPredicted RBP15.52■□□□□ 0.07
CKS1B-202ENST00000368436 CCDC88CQ9P219 2028 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 GRID2IPA4D2P6 1211 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 VPS4BO75351 444 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 SORBS2O94875 1100 aaKnown RBP15.51■□□□□ 0.07
CKS1B-202ENST00000368436 AP2A2O94973 939 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 PVRP15151 417 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 TPH1P17752 444 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 LMAN1P49257 510 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 VAV2P52735 878 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 NAP1L1P55209 391 aaKnown RBP15.51■□□□□ 0.07
CKS1B-202ENST00000368436 ITGA1P56199 1179 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 CACNG1Q06432 222 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 PRKG2Q13237 762 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 DBN1Q16643 649 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 ZNF385CQ66K41 422 aaPredicted RBP15.51■□□□□ 0.07
CKS1B-202ENST00000368436 ARHGEF18Q6ZSZ5 1173 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 CDHR3Q6ZTQ4 885 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 MED25Q71SY5 747 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 TAS2R42Q7RTR8 314 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 HPS6Q86YV9 775 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 TMTC1Q8IUR5 882 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 ZBTB2Q8N680 514 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 TTC13Q8NBP0 860 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 CPT1CQ8TCG5 803 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 XKR8Q9H6D3 395 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 LRRC40Q9H9A6 602 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 VPS4AQ9UN37 437 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 ICKQ9UPZ9 632 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 ZNF451Q9Y4E5 1061 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 MAP4K5Q9Y4K4 846 aa15.51■□□□□ 0.07
CKS1B-202ENST00000368436 BLACEA4D250 179 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 MROH6A6NGR9 719 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 E7EQ34 232 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 H3BMH7 237 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 LIN7AO14910 233 aaPredicted RBP15.5■□□□□ 0.07
CKS1B-202ENST00000368436 ZNF749O43361 778 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 HBQ1P09105 142 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 ACADLP28330 430 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 NSG1P42857 185 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 UQCRFS1P47985 274 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 ITIH4Q14624 930 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 POU6F1Q14863 301 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 NCF4Q15080 339 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 PTCHD3Q3KNS1 767 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 FAM69BQ5VUD6 431 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 SPESP1Q6UW49 350 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 RAD9BQ6WBX8 426 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 EFCAB3Q8N7B9 438 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 TMEM102Q8N9M5 508 aaPredicted RBP15.5■□□□□ 0.07
CKS1B-202ENST00000368436 FAM71DQ8N9W8 422 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 GLIS1Q8NBF1 620 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 FDCSPQ8NFU4 85 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 HGH1Q9BTY7 390 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 CHRNA10Q9GZZ6 450 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 KLHL25Q9H0H3 589 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 FAM60AQ9NP50 221 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 PRSS21Q9Y6M0 314 aa15.5■□□□□ 0.07
CKS1B-202ENST00000368436 SNRNP200O75643 2136 aaKnown RBP15.49■□□□□ 0.07
CKS1B-202ENST00000368436 PSMD3O43242 534 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 IPO7O95373 1038 aaKnown RBP15.49■□□□□ 0.07
CKS1B-202ENST00000368436 AP2A1O95782 977 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 TPBGLP0DKB5 382 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 AGXTP21549 392 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 GNLYP22749 145 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 SHMT2P34897 504 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 GABRA4P48169 554 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 KLF1Q13351 362 aaPredicted RBP15.49■□□□□ 0.07
CKS1B-202ENST00000368436 P3H1Q32P28 736 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 UNC5AQ6ZN44 842 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 OR5AR1Q8NGP9 310 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 FLVCR1-AS1Q8TAF5 88 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 SLC35B2Q8TB61 432 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.49■□□□□ 0.07
CKS1B-202ENST00000368436 TCTN2Q96GX1 697 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 OR2A14Q96R47 310 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 DHRS4Q9BTZ2 278 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 NUDT9Q9BW91 350 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 SLC7A5P2Q9GIP4 190 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 SMARCAL1Q9NZC9 954 aa15.49■□□□□ 0.07
CKS1B-202ENST00000368436 SLC5A10A0PJK1 596 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 GOLGA6L9A6NEM1 432 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 QSOX1O00391 747 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 ZNF185O15231 689 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 HCRTR1O43613 425 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 DPM1O60762 260 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 KLF7O75840 302 aaPredicted RBP15.48■□□□□ 0.07
CKS1B-202ENST00000368436 FTH1P02794 183 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 UGT2B7P16662 529 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 RRADP55042 308 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 GDF10P55107 478 aa15.48■□□□□ 0.07
CKS1B-202ENST00000368436 JMJD6Q6NYC1 403 aaPredicted RBP15.48■□□□□ 0.07
CKS1B-202ENST00000368436 PACS1Q6VY07 963 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms