RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 IZUMO3Q5VZ72 239 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 ANKS6Q68DC2 871 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 CEACAM20Q6UY09 585 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 CENPUQ71F23 418 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 MAATS1Q7Z4T9 603 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 AMIGO1Q86WK6 493 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 ZFAND4Q86XD8 727 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 KMT5CQ86Y97 462 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 CILP2Q8IUL8 1156 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 SLC22A15Q8IZD6 547 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 CARFQ8N187 725 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 KRT222Q8N1A0 295 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 C17orf53Q8N3J3 647 aaPredicted RBP9.58□□□□□ -0.88
CD48-202ENST00000368046 OTUD6BQ8N6M0 293 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 SPATA4Q8NEY3 305 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 OR52E1Q8NGJ3 308 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 CALML6Q8TD86 181 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 BIRC8Q96P09 236 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 MAP3K3Q99759 626 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 EBNA1BP2Q99848 306 aaKnown RBP9.58□□□□□ -0.88
CD48-202ENST00000368046 NAT9Q9BTE0 207 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 TRIT1Q9H3H1 467 aaKnown RBP9.58□□□□□ -0.88
CD48-202ENST00000368046 ZNF768Q9H5H4 540 aaKnown RBP9.58□□□□□ -0.88
CD48-202ENST00000368046 LATS2Q9NRM7 1088 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 INTS10Q9NVR2 710 aaKnown RBP9.58□□□□□ -0.88
CD48-202ENST00000368046 FOXJ2Q9P0K8 574 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 GNPTGQ9UJJ9 305 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 CDYLQ9Y232 598 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 UNC13CQ8NB66 2214 aa9.58□□□□□ -0.88
CD48-202ENST00000368046 CELSR3Q9NYQ7 3312 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 URB1O60287 2271 aaKnown RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 ZFHX4Q86UP3 3567 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 DSPP15924 2871 aaKnown RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 STMND1H3BQB6 276 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 TTI1O43156 1089 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 KDM1AO60341 852 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 TTC4O95801 387 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 ESR1P03372 595 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 PKMP14618 531 aaKnown RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 CHRM3P20309 590 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 PRDX3P30048 256 aaKnown RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 CSE1LP55060 971 aaKnown RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 EIF3BP55884 814 aaKnown RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 FOXM1Q08050 763 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 DHX9Q08211 1270 aaKnown RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 ABRQ12979 859 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 MORF4L2Q15014 288 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 TGIF1Q15583 401 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 DNAJC21Q5F1R6 531 aaKnown RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 DNTTIP2Q5QJE6 756 aaKnown RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 PLEKHS1Q5SXH7 462 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 HIBCHQ6NVY1 386 aaPredicted RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 CYB5D1Q6P9G0 228 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 SYT10Q6XYQ8 523 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 OTOAQ7RTW8 1153 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 BPHLQ86WA6 291 aaPredicted RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 PDIK1LQ8N165 341 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 AGGF1Q8N302 714 aaeCLIP9.57□□□□□ -0.88
CD48-202ENST00000368046 OR5AR1Q8NGP9 310 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 OR5K2Q8NHB8 316 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 GSDMBQ8TAX9 411 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 LPGAT1Q92604 370 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 ZNF669Q96BR6 464 aaPredicted RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 STAMBPL1Q96FJ0 436 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 SLC41A2Q96JW4 573 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 OR6C1Q96RD1 312 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 CCNL2Q96S94 520 aaPredicted RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 KRT12Q99456 494 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 CTRCQ99895 268 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 TRIM56Q9BRZ2 755 aaKnown RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 PRORYQ9H606 182 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 APMAPQ9HDC9 416 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 C1GALT1Q9NS00 363 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 C20orf96Q9NUD7 363 aaPredicted RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 SIDT1Q9NXL6 827 aaKnown RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 CRYL1Q9Y2S2 319 aa9.57□□□□□ -0.88
CD48-202ENST00000368046 ZNF106Q9H2Y7 1883 aaKnown RBP9.57□□□□□ -0.88
CD48-202ENST00000368046 FAM187AA6NFU0 413 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 TLCD2A6NGC4 264 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 EFCAB8A8MWE9 144 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 C2orf74A8MZ97 194 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 BTN3A3O00478 584 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 NDC80O14777 642 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 EFSO43281 561 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 HAUS5O94927 633 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 SEC31AO94979 1220 aaKnown RBP9.56□□□□□ -0.88
CD48-202ENST00000368046 ZBTB11O95625 1053 aaPredicted RBP9.56□□□□□ -0.88
CD48-202ENST00000368046 RPN2P04844 631 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 TPBGLP0DKB5 382 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 FGF5P12034 268 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 PGAM1P18669 254 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 MAP4P27816 1152 aaKnown RBP9.56□□□□□ -0.88
CD48-202ENST00000368046 ARL4DP49703 201 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 TMPRSS3P57727 454 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 PPP1CAP62136 330 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 SH3BP2P78314 561 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 HSD11B2P80365 405 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 PRR20EP86478 221 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 PRR20CP86479 221 aa9.56□□□□□ -0.88
CD48-202ENST00000368046 PRR20DP86480 221 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms