RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ADGRE3Q9BY15 652 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 CCM2LQ9NUG4 571 aaPredicted RBP14.11□□□□□ -0.15
VAMP4-202ENST00000367740 TXLNGQ9NUQ3 528 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 ZNF835Q9Y2P0 537 aa14.11□□□□□ -0.15
VAMP4-202ENST00000367740 INTS1Q8N201 2190 aaKnown RBP14.1□□□□□ -0.15
VAMP4-202ENST00000367740 KIAA1324LA8MWY0 1029 aaPredicted RBP14.1□□□□□ -0.15
VAMP4-202ENST00000367740 GPR39O43194 453 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 F10P00742 488 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 ATP1A3P13637 1013 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 TCF4P15884 667 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 PDAP1Q13442 181 aaKnown RBP14.1□□□□□ -0.15
VAMP4-202ENST00000367740 SKOR2Q2VWA4 1001 aaPredicted RBP14.1□□□□□ -0.15
VAMP4-202ENST00000367740 TMEM220Q6QAJ8 160 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 Q6ZPB1 254 aaPredicted RBP14.1□□□□□ -0.15
VAMP4-202ENST00000367740 Q71RC1 249 aaPredicted RBP14.1□□□□□ -0.15
VAMP4-202ENST00000367740 LRRC49Q8IUZ0 686 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 BEND7Q8N7W2 519 aaPredicted RBP14.1□□□□□ -0.15
VAMP4-202ENST00000367740 C19orf47Q8N9M1 422 aaKnown RBP14.1□□□□□ -0.15
VAMP4-202ENST00000367740 ACVR1CQ8NER5 493 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 BRSK1Q8TDC3 778 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 LCN9Q8WX39 176 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 FKBP10Q96AY3 582 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 MAGED4Q96JG8 741 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 GPR63Q9BZJ6 419 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 SRMSQ9H3Y6 488 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 WDR54Q9H977 334 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 MRM3Q9HC36 420 aaKnown RBP14.1□□□□□ -0.15
VAMP4-202ENST00000367740 MAGEE1Q9HCI5 957 aa14.1□□□□□ -0.15
VAMP4-202ENST00000367740 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.1□□□□□ -0.15
VAMP4-202ENST00000367740 DNMT3AQ9Y6K1 912 aaPredicted RBP14.1□□□□□ -0.15
VAMP4-202ENST00000367740 C17orf113A0A1B0GUU1 675 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 TMEM191CA6NGB0 347 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 MT-CYBP00156 380 aaPredicted RBP14.09□□□□□ -0.15
VAMP4-202ENST00000367740 SLC35G4P0C7Q5 338 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 NDUFS1P28331 727 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 PMP22Q01453 160 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 GALNT2Q10471 571 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 BECN1Q14457 450 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 SYCP1Q15431 976 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 ZIC1Q15915 447 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 NKG7Q16617 165 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 TPD52L1Q16890 204 aaPredicted RBP14.09□□□□□ -0.15
VAMP4-202ENST00000367740 ACAD10Q6JQN1 1059 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 TIGD7Q6NT04 549 aaPredicted RBP14.09□□□□□ -0.15
VAMP4-202ENST00000367740 SHISA6Q6ZSJ9 500 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 SPATA3Q8NHX4 192 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 PSMF1Q92530 271 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 HSPH1Q92598 858 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 HAS2Q92819 552 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 NINJ1Q92982 152 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 FATE1Q969F0 183 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 SMR3AQ99954 134 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 ZCCHC2Q9C0B9 1178 aaKnown RBP14.09□□□□□ -0.15
VAMP4-202ENST00000367740 PARVAQ9NVD7 372 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 TAS2R14Q9NYV8 317 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 PTGFRNQ9P2B2 879 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 FAM8A1Q9UBU6 413 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 COLEC10Q9Y6Z7 277 aa14.09□□□□□ -0.15
VAMP4-202ENST00000367740 AURKAO14965 403 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 GCGRP47871 477 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 RBBP7Q16576 425 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 COX15Q7KZN9 410 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 TRIM73Q86UV7 250 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 DDHD1Q8NEL9 900 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 LRRN4Q8WUT4 740 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 AGPAT1Q99943 283 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.08□□□□□ -0.16
VAMP4-202ENST00000367740 SOX17Q9H6I2 414 aaPredicted RBP14.08□□□□□ -0.16
VAMP4-202ENST00000367740 ZNF160Q9HCG1 818 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 PCDH18Q9HCL0 1135 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 BPIFA1Q9NP55 256 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 HAUS2Q9NVX0 235 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 ACSL5Q9ULC5 683 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 NBEAL1Q6ZS30 2694 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 GTF3C1Q12789 2109 aa14.08□□□□□ -0.16
VAMP4-202ENST00000367740 MGAT4DA6NG13 374 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 C2orf74A8MZ97 194 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 PRAMEF2O60811 474 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 USP1O94782 785 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 HPP00738 406 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 UGT1A4P22310 534 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 FOLH1Q04609 750 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 CACNG1Q06432 222 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 KRT33BQ14525 404 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 CEBPEQ15744 281 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 FNBP1LQ5T0N5 605 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 TXNRD3NBQ6F5E7 133 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 TLDC1Q6P9B6 456 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 SPESP1Q6UW49 350 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 CXXC5Q7LFL8 322 aaKnown RBP14.07□□□□□ -0.16
VAMP4-202ENST00000367740 OVCH1Q7RTY7 1134 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 BIVMQ86UB2 503 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 SPPL2CQ8IUH8 684 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 ADGRF3Q8IZF5 1079 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 LILRA3Q8N6C8 439 aaPredicted RBP14.07□□□□□ -0.16
VAMP4-202ENST00000367740 BRIX1Q8TDN6 353 aaKnown RBP14.07□□□□□ -0.16
VAMP4-202ENST00000367740 CA5BP1Q8WTZ4 195 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 PHF10Q8WUB8 498 aaKnown RBP14.07□□□□□ -0.16
VAMP4-202ENST00000367740 NAT14Q8WUY8 206 aa14.07□□□□□ -0.16
VAMP4-202ENST00000367740 XPO4Q9C0E2 1151 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms