RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 LEMD2Q8NC56 503 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 SLC22A17Q8WUG5 538 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 ISG20Q96AZ6 181 aaKnown RBP12.09□□□□□ -0.47
PTPN7-202ENST00000367279 EID2BQ96D98 161 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 MYO19Q96H55 970 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 ZIC5Q96T25 663 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 TNKS2Q9H2K2 1166 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 ZFYVE1Q9HBF4 777 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 IL17CQ9P0M4 197 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 DNAJB9Q9UBS3 223 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 BAG5Q9UL15 447 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 PDE10AQ9Y233 779 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 GMEB1Q9Y692 573 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 UPK3BL1B0FP48 263 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 UPK3BL2E5RIL1 263 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 H0Y858 1186 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 TAPBPO15533 448 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 NBNO60934 754 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 SH3BGRLO75368 114 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 DIRAS1O95057 198 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 FTH1P02794 183 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 ITGALP20701 1170 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 CLCN4P51793 760 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 BMXP51813 675 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 ADGRF1Q5T601 910 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 USP51Q70EK9 711 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 NECAB2Q7Z6G3 386 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 SLC15A4Q8N697 577 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 TMCO5AQ8N6Q1 288 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 TERB1Q8NA31 727 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 ADAMTS16Q8TE57 1224 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 GTF2H4Q92759 462 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 ACDQ96AP0 544 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 RIBC2Q9H4K1 309 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 TLR9Q9NR96 1032 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 MARCH5Q9NX47 278 aa12.09□□□□□ -0.47
PTPN7-202ENST00000367279 KRT87PA6NCN2 255 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 ZNF840PA6NDX5 716 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 TRIM64CA6NLI5 447 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 XPNPEP2O43895 674 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 ABCB7O75027 752 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 NPPAP01160 153 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 EPB42P16452 691 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 EFNA1P20827 205 aaPredicted RBP12.08□□□□□ -0.47
PTPN7-202ENST00000367279 DGKAP23743 735 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 SMAD3P84022 425 aaKnown RBP12.08□□□□□ -0.47
PTPN7-202ENST00000367279 PCBP2Q15366 365 aaKnown RBP eCLIP12.08□□□□□ -0.47
PTPN7-202ENST00000367279 FAM117BQ6P1L5 589 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 NCEH1Q6PIU2 408 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 CNIH3Q8TBE1 160 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 PYCR2Q96C36 320 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 SPATA17Q96L03 361 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 ARMC7Q9H6L4 198 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 SLC6A13Q9NSD5 602 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 GNPTGQ9UJJ9 305 aa12.08□□□□□ -0.47
PTPN7-202ENST00000367279 COL4A4P53420 1690 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-202ENST00000367279 DYTNA2CJ06 578 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 PABPN1LA6NDY0 278 aaKnown RBP12.08□□□□□ -0.48
PTPN7-202ENST00000367279 H7C4K7 107 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 ZNF701M0R085 212 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-202ENST00000367279 MITFO75030 526 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-202ENST00000367279 MSH3P20585 1137 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 CSKP41240 450 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 PLA2G16P53816 162 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 CD47Q08722 323 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 DGCR6Q14129 220 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 ZNF829Q3KNS6 432 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-202ENST00000367279 LRRC73Q5JTD7 316 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 DHRS4L2Q6PKH6 230 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 CRTC3Q6UUV7 619 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 SUSD1Q6UWL2 747 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 LRRC8DQ7L1W4 858 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 PIWIL3Q7Z3Z3 882 aaKnown RBP12.08□□□□□ -0.48
PTPN7-202ENST00000367279 ADGRG2Q8IZP9 1017 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 OR13F1Q8NGS4 319 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 SELENOMQ8WWX9 145 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 AMBRA1Q9C0C7 1298 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 RAD21L1Q9H4I0 556 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 NMRK2Q9NPI5 230 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 TMEM161AQ9NX61 479 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 ARL15Q9NXU5 204 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 F11P03951 625 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 CRHBPP24387 322 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 S100A3P33764 101 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 GSSP48637 474 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 C6orf141Q5SZD1 244 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 SPOUT1Q5T280 376 aaKnown RBP12.08□□□□□ -0.48
PTPN7-202ENST00000367279 ACBD5Q5T8D3 534 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-202ENST00000367279 CXorf57Q6NSI4 855 aaKnown RBP12.08□□□□□ -0.48
PTPN7-202ENST00000367279 RGMBQ6NW40 437 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 ANKS3Q6ZW76 656 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 RBFAQ8N0V3 343 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 SPARTQ8N0X7 666 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 ZBTB2Q8N680 514 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 ZNF548Q8NEK5 533 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-202ENST00000367279 NETO1Q8TDF5 533 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 ASIC4Q96FT7 647 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 P2RY12Q9H244 342 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 SLC25A37Q9NYZ2 338 aa12.08□□□□□ -0.48
PTPN7-202ENST00000367279 BLOC1S6Q9UL45 172 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms