RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 A6NHS1 94 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 K7ENM7 598 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ODC1P11926 461 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 EPB42P16452 691 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 NAT1P18440 290 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 HMGCS2P54868 508 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 TARDBPQ13148 414 aaKnown RBP eCLIP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 NTRK3Q16288 839 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 KIAA1161Q6NSJ0 714 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SPNS2Q8IVW8 549 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF764Q96H86 408 aaPredicted RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 BMFQ96LC9 184 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 THUMPD3Q9BV44 507 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 PKP3Q9Y446 797 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ZSCAN9O15535 394 aaPredicted RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CLDN3O15551 220 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 COL6A1P12109 1028 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 AGAP7PQ5VUJ5 663 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SLC15A3Q8IY34 581 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 PLA2G15Q8NCC3 412 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 STARD7Q9NQZ5 370 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 UFSP2Q9NUQ7 469 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 PADI2Q9Y2J8 665 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CXorf65A6NEN9 183 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 H3F3AP84243 136 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 LAPTM5Q13571 262 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 MPPED2Q15777 294 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 C5orf46Q6UWT4 87 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 LILRB4Q8NHJ6 448 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 NSMCE3Q96MG7 304 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 MSTO1Q9BUK6 570 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SCP2D1Q9UJQ7 156 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 G3V3Q6 166 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SLC25A27O95847 323 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 FPR1P21462 350 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF699Q32M78 642 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SCIMPQ6UWF3 145 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SPIN2AQ99865 258 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SPIN2BQ9BPZ2 258 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 LIPT1Q9Y234 373 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 PRSS44E7EML9 344 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 TACSTD2P09758 323 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RNF19BQ6ZMZ0 732 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SAYSD1Q9NPB0 183 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 PHKG2P15735 406 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SLC2A5P22732 501 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ASCL1P50553 236 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SORDQ00796 357 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 FAM122BQ7Z309 247 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 C7orf34Q96L11 122 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CSPG4P5Q96PW8 444 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 UBQLN2Q9UHD9 624 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 POLHQ9Y253 713 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SNCAIPQ9Y6H5 919 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 A0A096LPI6 279 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CCNKO75909 580 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CCNB2O95067 398 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CD48P09326 243 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CBSLP0DN79 551 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 TNNI1P19237 187 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CBSP35520 551 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 NUDT2P50583 147 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ADAM8P78325 824 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 FXNQ16595 210 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM143Q96AN5 459 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SNTG1Q9NSN8 517 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 NDUFS6O75380 124 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 YBX3P16989 372 aaKnown RBP eCLIP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 TPI1P60174 286 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 GTF2H2Q13888 395 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RBM39Q14498 530 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 GTF2H2CQ6P1K8 395 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SMIM15Q7Z3B0 74 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 VN1R5Q7Z5H4 357 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 DSELQ8IZU8 1212 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 C2orf15Q8WU43 125 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 PCED1AQ9H1Q7 454 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 EVA1BQ9NVM1 165 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 V9GYS6 101 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SLC1A3P43003 542 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RBM44Q6ZP01 1051 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 LGI4Q8N135 537 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 THEM5Q8N1Q8 247 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 OR8D2Q9GZM6 311 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 PCDHA11Q9Y5I1 949 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RNF225M0QZC1 329 aaPredicted RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 MOGSQ13724 837 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF404Q494X3 552 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 MSS51Q4VC12 460 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 METTL11BQ5VVY1 283 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 FTMTQ8N4E7 242 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 GRIN3AQ8TCU5 1115 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ABCG8Q9H221 673 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 PIH1D1Q9NWS0 290 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SYN3O14994 580 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SH3BGRLO75368 114 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 XKR9Q5GH70 373 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 GPR107Q5VW38 600 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 FBXO11Q86XK2 927 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 LRRC52Q8N7C0 313 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms