RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 CACNA1CQ13936 2221 aa8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 HRNRQ86YZ3 2850 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P39-201ENST00000366304 FAM221AA4D161 298 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 TMEM191CA6NGB0 347 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 BTN3A1O00481 513 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 MFSD11O43934 449 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 PRPSAP2O60256 369 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 KLHL41O60662 606 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 SLC19A2O60779 497 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 IGHEP01854 428 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 HLA-DPA1P20036 260 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 AGAP20933 346 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 MMP11P24347 488 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 PBLDP30039 288 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 CD86P42081 329 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 TNFSF10P50591 281 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 POLR2FP61218 127 aaKnown RBP8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 PMP22Q01453 160 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 LTBQ06643 244 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 DPYSL2Q16555 572 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 NKAIN1Q4KMZ8 207 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 METRNLQ641Q3 311 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 RHBDD2Q6NTF9 364 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 DCUN1D2Q6PH85 259 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 ISLR2Q6UXK2 745 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 SHISA6Q6ZSJ9 500 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 COX15Q7KZN9 410 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 TRIM73Q86UV7 250 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 AMZ2Q86W34 360 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 HSCBQ8IWL3 235 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 BBS5Q8N3I7 341 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 CNTD1Q8N815 330 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 CCHCR1Q8TD31 782 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 COG1Q8WTW3 980 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 PSMF1Q92530 271 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 THOC3Q96J01 351 aaKnown RBP8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 RMDN2Q96LZ7 410 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 LHPPQ9H008 270 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 BPIFA1Q9NP55 256 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 RBM22Q9NW64 420 aaKnown RBP eCLIP8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 IFT80Q9P2H3 777 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 SEC14L3Q9UDX4 400 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 SERTAD3Q9UJW9 196 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 TTLL3Q9Y4R7 772 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 ATRQ13535 2644 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 CSPG4Q6UVK1 2322 aa8.18□□□□□ -1.1
HMGB1P39-201ENST00000366304 ANKRD62A6NC57 917 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 OR2AG2A6NM03 316 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 H3BRJ5 948 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 ADAM10O14672 748 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 MATN3O15232 486 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 UGT1A9O60656 530 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 GADD45BO75293 160 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 CD48P09326 243 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 IGFBP2P18065 325 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 UGT1A6P19224 532 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 UGT1A1P22309 533 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 UGT1A4P22310 534 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 SOX11P35716 441 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 DCDP81605 110 aaKnown RBP8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 XRCC4Q13426 336 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 NOMO1Q15155 1222 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 PDPK2PQ6A1A2 396 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 ARMC6Q6NXE6 501 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 PSTKQ8IV42 348 aaKnown RBP8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 DTWD1Q8N5C7 304 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 ZNF655Q8N720 491 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 OR11G2Q8NGC1 345 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 HSPH1Q92598 858 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 C12orf66Q96MD2 445 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 VPS35Q96QK1 796 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 AGPAT1Q99943 283 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 SYT11Q9BT88 431 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 LIME1Q9H400 295 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 DEF6Q9H4E7 631 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 XKR8Q9H6D3 395 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 ZWILCHQ9H900 591 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 UGT1A7Q9HAW7 530 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 UGT1A10Q9HAW8 530 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 UGT1A8Q9HAW9 530 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 SYTL2Q9HCH5 934 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 PCDH18Q9HCL0 1135 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 RAB6BQ9NRW1 208 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 SAMSN1Q9NSI8 373 aaKnown RBP8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 SEPT11Q9NVA2 429 aaKnown RBP8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 ABI3Q9P2A4 366 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 FAM8A1Q9UBU6 413 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 GPN3Q9UHW5 284 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 CDC23Q9UJX2 597 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 ZNF835Q9Y2P0 537 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 MEMO1Q9Y316 297 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 ZNF711Q9Y462 761 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 NUP210LQ5VU65 1888 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 AKAP6Q13023 2319 aa8.17□□□□□ -1.1
HMGB1P39-201ENST00000366304 GSAPA4D1B5 854 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 SLC35F4A4IF30 521 aa8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 GAPDHSO14556 408 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P39-201ENST00000366304 SGTAO43765 313 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms