RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 FLNCQ14315 2725 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 H3BMH7 237 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CPNE3O75131 537 aaKnown RBP13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 SCRG1O75711 98 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 FTH1P02794 183 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CDH3P22223 829 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 RORAP35398 523 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ARL4DP49703 201 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CCZ1BP86790 482 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CCZ1P86791 482 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PLOD1Q02809 727 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ABRQ12979 859 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 GPS2Q13227 327 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PRKG2Q13237 762 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ERV3-1Q14264 604 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PRAMEF17Q5VTA0 474 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 IZUMO3Q5VZ72 239 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ZNF449Q6P9G9 518 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 AFTPHQ6ULP2 937 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PPP1R21Q6ZMI0 780 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ATG14Q6ZNE5 492 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 TMEM135Q86UB9 458 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 TBC1D21Q8IYX1 336 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 OR5AR1Q8NGP9 310 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ELMO1Q92556 727 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ABHD17AQ96GS6 310 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 XKR8Q9H6D3 395 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 LZTFL1Q9NQ48 299 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CHRAC1Q9NRG0 131 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 TREX1Q9NSU2 369 aa13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 HEMK1Q9Y5R4 338 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF1A-202ENST00000366159 C2orf74A8MZ97 194 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 E7EVH7 732 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PYCARD-AS1I3L0S3 204 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 KATNA1O75449 491 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 GPC4O75487 556 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 WISP1O95388 367 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 GAS8O95995 478 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CAPN1P07384 714 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 APRTP07741 180 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CCDC175P0C221 793 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 OR56A5P0C7T3 313 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PTPN4P29074 926 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CCR7P32248 378 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 GABRA4P48169 554 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PCID2Q5JVF3 399 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PLEKHS1Q5SXH7 462 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 LCN10Q6JVE6 187 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 C4orf22Q6V702 233 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 NAPRTQ6XQN6 538 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 UNC5AQ6ZN44 842 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PRICKLE2Q7Z3G6 844 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CCDC89Q8N998 374 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 OR1L3Q8NH93 324 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 OR5K2Q8NHB8 316 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 OR2A14Q96R47 310 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 HGH1Q9BTY7 390 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 MENTQ9BUN1 341 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CARD6Q9BX69 1037 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 AP1M1Q9BXS5 423 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CHRNA10Q9GZZ6 450 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ACTL8Q9H568 366 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ACTR10Q9NZ32 417 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 POLG2Q9UHN1 485 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 POLHQ9Y253 713 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 RELNP78509 3460 aa13.24□□□□□ -0.29
TNFRSF1A-202ENST00000366159 GSAPA4D1B5 854 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 FGGP02679 453 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PVRP15151 417 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 SHMT2P34897 504 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 KCNJ1P48048 391 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 LMAN1P49257 510 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 BRD3Q15059 726 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ZIC1Q15915 447 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 SPESP1Q6UW49 350 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CDHR3Q6ZTQ4 885 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 TMEM126BQ8IUX1 230 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 VRK3Q8IV63 474 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 APLFQ8IW19 511 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 SLC22A15Q8IZD6 547 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 DSELQ8IZU8 1212 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 TRIM58Q8NG06 486 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 C9orf43Q8TAL5 461 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 LKAAEAR1Q8TD35 194 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 P2RY12Q9H244 342 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PCMTD2Q9NV79 361 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 SOHLH2Q9NX45 425 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 SPHK1Q9NYA1 384 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 OR6C2Q9NZP2 312 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 MARCH4Q9P2E8 410 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 FARSAQ9Y285 508 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ASF1AQ9Y294 204 aa13.23□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PIPSLA2A3N6 862 aa13.22□□□□□ -0.29
TNFRSF1A-202ENST00000366159 MEN1O00255 615 aa13.22□□□□□ -0.29
TNFRSF1A-202ENST00000366159 HCRTR1O43613 425 aa13.22□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CHRM5P08912 532 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1A-202ENST00000366159 RAB40ALP0C0E4 278 aa13.22□□□□□ -0.29
TNFRSF1A-202ENST00000366159 SPTBP11277 2137 aa13.22□□□□□ -0.29
TNFRSF1A-202ENST00000366159 AOAHP28039 575 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms