RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 GAPDHSO14556 408 aaPredicted RBP4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 RAF1P04049 648 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 EDN1P05305 212 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 FAM157CP0CG43 387 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 TRIM21P19474 475 aaKnown RBP4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 CA4P22748 312 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 NRIP1P48552 1158 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 PNLIPRP2P54317 469 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 SNRPD1P62314 119 aaKnown RBP4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 CX3CL1P78423 397 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 GPR17Q13304 367 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 MYPOPQ86VE0 399 aaPredicted RBP4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 COMMD2Q86X83 199 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 TMEM139Q8IV31 216 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 LINC00346Q8IVM7 164 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 CEP57L1Q8IYX8 460 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 OR2T11Q8NH01 316 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 TIGD1Q96MW7 591 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 ASCL2Q99929 193 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 LAT2Q9GZY6 243 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 ARRDC1-AS1Q9H2J1 176 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 C2orf42Q9NWW7 574 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 TAB2Q9NYJ8 693 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 OSGIN1Q9UJX0 560 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 MTUS1Q9ULD2 1270 aa4.01□□□□□ -1.77
RNU4-28P-201ENST00000364739 LOC101059948A0A1B0GTJ6 334 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 hCG_1807616A0A1W2PRN6 198 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 PRR32B1ATL7 298 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 ATP6V0E1O15342 81 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 AVILO75366 819 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 CRLF1O75462 422 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 CDC123O75794 336 aaPredicted RBP4□□□□□ -1.77
RNU4-28P-201ENST00000364739 SORBS2O94875 1100 aaKnown RBP4□□□□□ -1.77
RNU4-28P-201ENST00000364739 DNASE1P24855 282 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 ACSL1P33121 698 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 BMXP51813 675 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 LUMP51884 338 aaPredicted RBP4□□□□□ -1.77
RNU4-28P-201ENST00000364739 KLHL26Q53HC5 615 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 XKR6Q5GH73 641 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 PLEKHS1Q5SXH7 462 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 ITPRIPL1Q6GPH6 555 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 Q6ZSR9 355 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 ADIPOR2Q86V24 386 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 PIGZQ86VD9 579 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 CEP57Q86XR8 500 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 CFAP206Q8IYR0 622 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 ARHGAP24Q8N264 748 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 TRIML1Q8N9V2 468 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 MAPK1IP1LQ8NDC0 245 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 HPSE2Q8WWQ2 592 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 POM121L2Q96KW2 1035 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 SDR39U1Q9NRG7 319 aaPredicted RBP4□□□□□ -1.77
RNU4-28P-201ENST00000364739 KLHL8Q9P2G9 620 aaPredicted RBP4□□□□□ -1.77
RNU4-28P-201ENST00000364739 VPS28Q9UK41 221 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 PCDHGB4Q9UN71 923 aa4□□□□□ -1.77
RNU4-28P-201ENST00000364739 IGHV4-4A0A075B6R2 117 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 A0A087WW49 117 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 KRTAP16-1A8MUX0 517 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 PRKRAO75569 313 aaKnown RBP3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 AP2A2O94973 939 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 CSH1P0DML2 217 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 CSH2P0DML3 217 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 VPREB1P12018 145 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 EFNA1P20827 205 aaPredicted RBP3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 SNX16P57768 344 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 SIRPAP78324 504 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 CDK3Q00526 305 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 PPARDQ03181 441 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 HNRNPDQ14103 355 aaKnown RBP3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 LINGO4Q6UY18 593 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 ZNF611Q8N823 705 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 MRGPRDQ8TDS7 321 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 IRGQQ8WZA9 623 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 LINC00479Q96M42 142 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 KIFC3Q9BVG8 833 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 OSGEPL1Q9H4B0 414 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 ERVMER34-1Q9H9K5 563 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 B3GAT1Q9P2W7 334 aa3.99□□□□□ -1.77
RNU4-28P-201ENST00000364739 TDRD15B5MCY1 1934 aaKnown RBP3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 ANKUB1A6NFN9 424 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 A8MV72 311 aaPredicted RBP3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 SH3BP5O60239 455 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 PRAMEF11O60813 436 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 ENTPD3O75355 529 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 ZFAND5O76080 213 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 CEBPBP17676 345 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 SLC6A12P48065 614 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 ARSEP51690 589 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 CDH13P55290 713 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 PCLAFQ15004 111 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 RILPL1Q5EBL4 403 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 XKR3Q5GH77 459 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 TMEM211Q6ICI0 200 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 TMPRSS11FQ6ZWK6 438 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 CALML4Q96GE6 196 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 NEK1Q96PY6 1258 aa3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 OPRPNQ99935 248 aaPredicted RBP3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 TREX2Q9BQ50 279 aaPredicted RBP3.98□□□□□ -1.77
RNU4-28P-201ENST00000364739 LMF2Q9BU23 707 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms