RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 BSCL2Q96G97 398 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SLC5A7Q9GZV3 580 aa4.38□□□□□ -1.71
RNU6-1339P-201ENST00000363574 CDH20Q9HBT6 801 aa4.38□□□□□ -1.71
RNU6-1339P-201ENST00000363574 IARS2Q9NSE4 1012 aaKnown RBP4.38□□□□□ -1.71
RNU6-1339P-201ENST00000363574 POT1Q9NUX5 634 aa4.38□□□□□ -1.71
RNU6-1339P-201ENST00000363574 TMEM30AQ9NV96 361 aa4.38□□□□□ -1.71
RNU6-1339P-201ENST00000363574 DNAJC17Q9NVM6 304 aaKnown RBP4.38□□□□□ -1.71
RNU6-1339P-201ENST00000363574 VPS18Q9P253 973 aa4.38□□□□□ -1.71
RNU6-1339P-201ENST00000363574 PDS5AQ29RF7 1337 aaKnown RBP4.38□□□□□ -1.71
RNU6-1339P-201ENST00000363574 ARID1BQ8NFD5 2236 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1339P-201ENST00000363574 LILRA5A6NI73 299 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 DUXAA6NLW8 204 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 ANKRD66B4E2M5 251 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 RTCAO00442 366 aaKnown RBP4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 BUD23O43709 281 aaKnown RBP4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 FCGR3BO75015 233 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 KDM4BO94953 1096 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 PGLSO95336 258 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 OLFM2O95897 454 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 PNPP00491 289 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SAGP10523 405 aaPredicted RBP4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 ITIH1P19827 911 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 PSMB4P28070 264 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 TMPOP42166 694 aaKnown RBP4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 PSMC4P43686 418 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 KHKP50053 298 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 YBEYP58557 167 aaPredicted RBP4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 ISL1P61371 349 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 DLK1P80370 383 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 MAT1AQ00266 395 aaKnown RBP4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 CUL3Q13618 768 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 ZNF234Q14588 700 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SLC39A14Q15043 492 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 FAM174BQ3ZCQ3 159 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 KBTBD12Q3ZCT8 623 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 LRRC73Q5JTD7 316 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 FAM122CQ6P4D5 195 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 KLC3Q6P597 504 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 NOTUMQ6P988 496 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 ZNF449Q6P9G9 518 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 ZNF704Q6ZNC4 412 aaPredicted RBP4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 TECPR1Q7Z6L1 1165 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 PIM3Q86V86 326 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SRRM1Q8IYB3 904 aaKnown RBP4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 RNF113BQ8IZP6 322 aaKnown RBP4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 ARHGAP24Q8N264 748 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SPATA20Q8TB22 786 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 NTN5Q8WTR8 489 aaPredicted RBP4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SLC20A1Q8WUM9 679 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SSMEM1Q8WWF3 244 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 STAMBPL1Q96FJ0 436 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SCMH1Q96GD3 660 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 HNRNPABQ99729 332 aaKnown RBP4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SLX1AQ9BQ83 275 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 DNAJC4Q9NNZ3 241 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 TCP11L1Q9NUJ3 509 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 C11orf21Q9P2W6 132 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SPIN1Q9Y657 262 aaPredicted RBP4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 TAF1P21675 1872 aa4.37□□□□□ -1.71
RNU6-1339P-201ENST00000363574 TEX13DA0A0J9YY54 714 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 A0A1W2PPK0 400 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 HYKKA2RU49 373 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SMIM30A4D0T7 59 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 C5orf60A6NFR6 353 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 C19orf81C9J6K1 198 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SOCS2O14508 198 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 KCNJ13O60928 360 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 WDPCPO95876 746 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SLC16A8O95907 504 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 HMOX1P09601 288 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 LINC00271P0C7V0 271 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SMIM18P0DKX4 95 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SPP1P10451 314 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 UROSP10746 265 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 EPCAMP16422 314 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 POLR2CP19387 275 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 CD27P26842 260 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 PTGER4P35408 488 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 RGS7P49802 495 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 MMP15P51511 669 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 TMEM35AQ53FP2 167 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SYT14P1Q58G82 188 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 KCTD9Q7L273 389 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 FJX1Q86VR8 437 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 COMMD2Q86X83 199 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 ODF3L1Q8IXM7 274 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 CLYBLQ8N0X4 340 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 SFRP1Q8N474 314 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 ZNF114Q8NC26 417 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 B4GALNT2Q8NHY0 566 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 VANGL1Q8TAA9 524 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 FAM216AQ8WUB2 273 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 TMEM255BQ8WV15 326 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 RIT1Q92963 219 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 ATP6V0A1Q93050 837 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 RPL36ALQ969Q0 106 aaKnown RBP4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 ZG16BQ96DA0 208 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 MTBPQ96DY7 904 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 OR1F2PQ96R84 312 aa4.36□□□□□ -1.71
RNU6-1339P-201ENST00000363574 RAD9AQ99638 391 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms