RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 FADS2P1A8MWK0 482 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 SLC30A4O14863 429 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 PER2O15055 1255 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 FYNP06241 537 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 HTR7P34969 479 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 IFNGR2P38484 337 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 LRP8Q14114 963 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 CLCA4Q14CN2 919 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 USP39Q53GS9 565 aaKnown RBP15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 BLOC1S3Q6QNY0 202 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 LAPTM4BQ86VI4 370 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 ATL1Q8WXF7 558 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 ARNTL2Q8WYA1 636 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 C14orf119Q9NWQ9 140 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 CMTM6Q9NX76 183 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 PCDHB9Q9Y5E1 797 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 LYVE1Q9Y5Y7 322 aa15.71■□□□□ 0.1
CLSTN1-201ENST00000361311 CENPBD1B2RD01 187 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 ENPP3O14638 875 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 SCAMP3O14828 347 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 CXCR3P49682 368 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 RPS3AP61247 264 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 BCL2L1Q07817 233 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.7■□□□□ 0.13e-7■■■■■ 27.8
CLSTN1-201ENST00000361311 MMAAQ8IVH4 418 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 ADGRG5Q8IZF4 528 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 RBFAQ8N0V3 343 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 PCED1BQ96HM7 432 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 PYURFQ96I23 114 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 NPY6RQ99463 290 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 HAPLN2Q9GZV7 340 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 NKIRAS2Q9NYR9 191 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 AHSPQ9NZD4 102 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 PCDHGB3Q9Y5G1 929 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 CNTNAP1P78357 1384 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 MYBPHLA2RUH7 354 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 HCRTO43612 131 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 MPZL2O60487 215 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 CLDN9O95484 217 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 PRPS2P11908 318 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 EPORP19235 508 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 CAPN3P20807 821 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 OXTRP30559 389 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 HNRNPFP52597 415 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 SMIM11AP58511 58 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 XKR6Q5GH73 641 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 ANXA8L1Q5VT79 327 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 SDHAF4Q5VUM1 108 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 FAM151BQ6UXP7 276 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 SNX29P2Q8IUI4 249 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 RAET1EQ8TD07 263 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 TTYH2Q9BSA4 534 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 AGO1Q9UL18 857 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 SLC27A5Q9Y2P5 690 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 CDC7O00311 574 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 RHOQP17081 205 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 KIAA1614Q5VZ46 1190 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 MFSD14CQ5VZR4 134 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 PSMG2Q969U7 264 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 RPL10LQ96L21 214 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 SNX27Q96L92 541 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 FRMD6Q96NE9 622 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 WDR83Q9BRX9 315 aaKnown RBP15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 KRCC1Q9NPI7 259 aaPredicted RBP15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 TAS2R9Q9NYW1 312 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 COMMD3Q9UBI1 195 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 ARL5AQ9Y689 179 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 NRCAMQ92823 1304 aa15.7■□□□□ 0.1
CLSTN1-201ENST00000361311 CROCCQ5TZA2 2017 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 NUAK1O60285 661 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 ITGB1P05556 798 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 MAPK12P53778 367 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 UNC50Q53HI1 259 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 USP30Q70CQ3 517 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 C16orf59Q7L2K0 433 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 HMCESQ96FZ2 354 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 NSUN5Q96P11 429 aaKnown RBP15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 COL21A1Q96P44 957 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 SLC38A2Q96QD8 506 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 TIGARQ9NQ88 270 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 ZNF214Q9UL59 606 aaPredicted RBP15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 NUMBLQ9Y6R0 609 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 ANKDD1BA6NHY2 528 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 A8MU76 341 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 MAGEB17A8MXT2 336 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 SERPINB7O75635 380 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 SLITRK5O94991 958 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 SLC25A14O95258 325 aaPredicted RBP15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 CSF2P04141 144 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 ANXA8P13928 327 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 CTPS1P17812 591 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 TNNI3P19429 210 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 EFNA1P20827 205 aaPredicted RBP15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 STX4Q12846 297 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 PCBP1Q15365 356 aaKnown RBP eCLIP15.69■□□□□ 0.11e-6■■■■■ 43.1
CLSTN1-201ENST00000361311 TSTQ16762 297 aaKnown RBP15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 C6orf136Q5SQH8 315 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 CILP2Q8IUL8 1156 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 SPARTQ8N0X7 666 aa15.69■□□□□ 0.1
CLSTN1-201ENST00000361311 CRELD1Q96HD1 420 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms