RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 PCBP2Q15366 365 aaKnown RBP eCLIP12.18□□□□□ -0.46
UBA3-202ENST00000361055 AARS2Q5JTZ9 985 aaKnown RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 RBM48Q5RL73 367 aaKnown RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 ANKRD54Q6NXT1 300 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 RALGPS2Q86X27 583 aaPredicted RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 LGI2Q8N0V4 545 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 CDYL2Q8N8U2 506 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 OR8J3Q8NGG0 315 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 KCNJ9Q92806 393 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 TCEAL4Q96EI5 215 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 NSMCE3Q96MG7 304 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 SLC22A12Q96S37 553 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 PAIP1Q9H074 479 aaKnown RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 GORASP2Q9H8Y8 452 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 UBA2Q9UBT2 640 aaPredicted RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 USP22Q9UPT9 525 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 TRIOBPQ9H2D6 2365 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 A0A0D9SEW6 157 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 A0A1W2PPW3 197 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 SOX1O00570 391 aaPredicted RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 NRG2O14511 850 aaPredicted RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 NOL3O60936 208 aaKnown RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 CBFA2T3O75081 653 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 GMNNO75496 209 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 SEC14L2O76054 403 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 ALPLP05186 524 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 CKMP06732 381 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 ZNF12P17014 697 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 GGT1P19440 569 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 CDKN1CP49918 316 aaPredicted RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 SCNN1BP51168 640 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 NTHL1P78549 312 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 CHRNB3Q05901 458 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 TEAD2Q15562 447 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 FGD3Q5JSP0 725 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 BROXQ5VW32 411 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 TTC23Q5W5X9 447 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 DUS1LQ6P1R4 473 aaKnown RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 THAP5Q7Z6K1 395 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 GALNT13Q8IUC8 556 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 PIANPQ8IYJ0 282 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 SIDT2Q8NBJ9 832 aaKnown RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 ITFG1Q8TB96 612 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 METTL6Q8TCB7 284 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 CD200R1Q8TD46 325 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 NRBF2Q96F24 287 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 LINGO1Q96FE5 620 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 CINPQ9BW66 212 aaPredicted RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 SLC46A2Q9BY10 475 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 UGT2B28Q9BY64 529 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 SOX17Q9H6I2 414 aaPredicted RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 NUDT4Q9NZJ9 180 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 EIF2B4Q9UI10 523 aaKnown RBP12.18□□□□□ -0.46
UBA3-202ENST00000361055 SLC30A1Q9Y6M5 507 aa12.18□□□□□ -0.46
UBA3-202ENST00000361055 REV3LO60673 3130 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 C16orf96A6NNT2 1141 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 ANKRD28O15084 1053 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 MAGEB3O15480 346 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 STC2O76061 302 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 ESR1P03372 595 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 THRBP10828 461 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 CCNA2P20248 432 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 POLR2IP36954 125 aaKnown RBP12.17□□□□□ -0.46
UBA3-202ENST00000361055 PTGER3P43115 390 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 KCNQ1P51787 676 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 TGFBIQ15582 683 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 CTSL3PQ5NE16 218 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 OTUD3Q5T2D3 398 aaPredicted RBP12.17□□□□□ -0.46
UBA3-202ENST00000361055 ANKRD26P1Q6NSI1 321 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 CYP20A1Q6UW02 462 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 GPR149Q86SP6 731 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 RBM12BQ8IXT5 1001 aaKnown RBP12.17□□□□□ -0.46
UBA3-202ENST00000361055 DTWD1Q8N5C7 304 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 TMBIM1Q969X1 311 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 ZNF583Q96ND8 569 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 CCDC115Q96NT0 180 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 PIF1Q9H611 641 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 HPS4Q9NQG7 708 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 GKN1Q9NS71 199 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 ZNF510Q9Y2H8 683 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 MRPS23Q9Y3D9 190 aaKnown RBP12.17□□□□□ -0.46
UBA3-202ENST00000361055 CPQQ9Y646 472 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 SZT2Q5T011 3432 aa12.17□□□□□ -0.46
UBA3-202ENST00000361055 NUP210Q8TEM1 1887 aaPredicted RBP12.17□□□□□ -0.46
UBA3-202ENST00000361055 H7C0S8 307 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 ABCB7O75027 752 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 NIPSNAP2O75323 286 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 KATNA1O75449 491 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 MT-ND1P03886 318 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 HNRNPCP07910 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
UBA3-202ENST00000361055 G6PDP11413 515 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 IMPDH2P12268 514 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 JAK1P23458 1154 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 MC4RP32245 332 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 RGRP47804 291 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 CDH4P55283 916 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 C21orf59P57076 290 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 EPS8Q12929 822 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 NFATC3Q12968 1075 aa12.16□□□□□ -0.46
UBA3-202ENST00000361055 SKIV2LQ15477 1246 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms