RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 CLHC1Q8NHS4 586 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 HSD17B14Q9BPX1 270 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 ADRB2P07550 413 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 ACSL1P33121 698 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 RBM34P42696 430 aaKnown RBP9.53□□□□□ -0.88
CUX1-203ENST00000360264 PLA2G4EQ3MJ16 856 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 PPP1R13LQ8WUF5 828 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 FUBP3Q96I24 572 aaKnown RBP eCLIP9.53□□□□□ -0.88
CUX1-203ENST00000360264 ADM5C9JUS6 153 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 DGKGP49619 791 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 AMZ1Q400G9 498 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 DEFB132Q7Z7B7 95 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 SPATA7Q9P0W8 599 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 PGDP52209 483 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 ECT2LQ008S8 904 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 CRY2Q49AN0 593 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 ATP6V1C2Q8NEY4 427 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 ZMIZ2Q8NF64 920 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 FAM210AQ96ND0 272 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 ANKHQ9HCJ1 492 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 FLRT1Q9NZU1 646 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 SLC7A4O43246 635 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 CASP9P55211 416 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 OTOP3Q7RTS5 596 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 NDC1Q9BTX1 674 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 BLOC1S4Q9NUP1 217 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 FKBP7Q9Y680 259 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 L7N2F9 121 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 PLOD2O00469 737 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 NCBP2P52298 156 aaKnown RBP eCLIP9.53□□□□□ -0.882e-6■■□□□ 13
CUX1-203ENST00000360264 ACTR1AP61163 376 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 VAMP2P63027 116 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 DSC2Q02487 901 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 CLCQ05315 142 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 ALG10Q5BKT4 473 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 UNQ6126/PRO20091Q6UXV3 157 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 GEMIN6Q8WXD5 167 aaKnown RBP9.53□□□□□ -0.88
CUX1-203ENST00000360264 PIGKQ92643 395 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 EXOSC8Q96B26 276 aaKnown RBP9.53□□□□□ -0.88
CUX1-203ENST00000360264 DKK3Q9UBP4 350 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 SEC14L4Q9UDX3 406 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 RALGAPA1Q6GYQ0 2036 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 HYKKA2RU49 373 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 SP100P23497 879 aaPredicted RBP9.52□□□□□ -0.88
CUX1-203ENST00000360264 SERPINA9Q86WD7 417 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 PHF24Q9UPV7 400 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 PGAM2P15259 253 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 GSTM3P21266 225 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 L1CAMP32004 1257 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 BTN3A2P78410 334 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 SGCBQ16585 318 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 KCTD21Q4G0X4 260 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 KLHL22Q53GT1 634 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 SATL1Q86VE3 508 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 TSEN2Q8NCE0 465 aaKnown RBP9.52□□□□□ -0.88
CUX1-203ENST00000360264 C7orf26Q96N11 449 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 C19orf25Q9UFG5 118 aaPredicted RBP9.52□□□□□ -0.88
CUX1-203ENST00000360264 TMED5Q9Y3A6 229 aa9.52□□□□□ -0.88
CUX1-203ENST00000360264 C2P06681 752 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 TUBA3CQ13748 450 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 ENPP2Q13822 863 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 TMEM220Q6QAJ8 160 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 SAPCD2Q86UD0 394 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 CAMKVQ8NCB2 501 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 IFT27Q9BW83 186 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 SLC2A11Q9BYW1 496 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 RPL7AP62424 266 aaKnown RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 POU5F1Q01860 360 aaKnown RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 AAK1Q2M2I8 961 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 ZFP69Q49AA0 526 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 SPATA6LQ8N4H0 392 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 LMLNQ96KR4 655 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 HAPLN3Q96S86 360 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 ST6GALNAC4Q9H4F1 302 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 MKLN1Q9UL63 735 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 FSCN2O14926 492 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 CORO1AP31146 461 aaKnown RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 IFI44LQ53G44 452 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 POLR2J3Q9H1A7 115 aaKnown RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 TLR6Q9Y2C9 796 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 TCAF1Q9Y4C2 921 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 CLCA3PQ9Y6N3 262 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 PAPSS1O43252 624 aaPredicted RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 DBIP07108 87 aaKnown RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 TREML1Q86YW5 311 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 TTYH1Q9H313 450 aaPredicted RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 ZNF221Q9UK13 617 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 PET100P0DJ07 73 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 MAP3K8P41279 467 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 CAND1Q86VP6 1230 aaKnown RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 WDR26Q9H7D7 661 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 P2RX2Q9UBL9 471 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 MAFBQ9Y5Q3 323 aaPredicted RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 ELOA3DA6NLF2 546 aaPredicted RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 ANKRD63C9JTQ0 380 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 CPN2P22792 545 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 CASP6P55212 293 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 ELOA3BQ3SY89 546 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 FUT10Q6P4F1 479 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 MBOAT1Q6ZNC8 495 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms