RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 COL9A1P20849 921 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 NFKBIAP25963 317 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 RGS4P49798 205 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 EMP3P54852 163 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 PTSQ03393 145 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 CLCQ05315 142 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 LCP2Q13094 533 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 CYLC2Q14093 348 aaPredicted RBP13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 MAP7Q14244 749 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 C6orf52Q5T4I8 152 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 DSELQ8IZU8 1212 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 METTL25Q8N6Q8 603 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 FLCNQ8NFG4 579 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 ULK4Q96C45 1275 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 SARS2Q9NP81 518 aaKnown RBP13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 NUDT4Q9NZJ9 180 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 KLHL42Q9P2K6 505 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 PSMD13Q9UNM6 376 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 NCOR1O75376 2440 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 MAN2B1O00754 1011 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 CASQ2O14958 399 aaPredicted RBP13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 DNAJA2O60884 412 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 CYP2A6P11509 494 aaPredicted RBP13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 ZNF30P17039 623 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 PSMD8P48556 350 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 CDH13P55290 713 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 MS4A2Q01362 244 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 FAM219BQ5XKK7 198 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 ADAMTSL2Q86TH1 951 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 BHLHE22Q8NFJ8 381 aaPredicted RBP13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 HCAR2Q8TDS4 363 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 HSPBAP1Q96EW2 488 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 MSANTD3Q96H12 275 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 LRIG1Q96JA1 1093 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 LRGUKQ96M69 825 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 MKRN2Q9H000 416 aaKnown RBP13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 MID1IP1Q9NPA3 183 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 WNT16Q9UBV4 365 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 FIS1Q9Y3D6 152 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 COPG1Q9Y678 874 aaKnown RBP13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 AP4B1Q9Y6B7 739 aa13.59□□□□□ -0.23
CSNK1E-201ENST00000359867 A0A1B0GTW7 788 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 TSPAN11A1L157 253 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 IQCF5A8MTL0 148 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 AZIN1O14977 448 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 SYNCRIPO60506 623 aaKnown RBP13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 SNX2O60749 519 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 MLYCDO95822 493 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 CHRNB1P11230 501 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 UGT1A6P19224 532 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 UGT1A1P22309 533 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 UGT1A4P22310 534 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 DGKAP23743 735 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 UGT1A3P35503 534 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 UGT1A5P35504 534 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 DPP6P42658 865 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 NSG1P42857 185 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 CEACAM7Q14002 265 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 SMUG1Q53HV7 270 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 KANK2Q63ZY3 851 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 LILRA2Q8N149 483 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 PBXIP1Q96AQ6 731 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 GABRG3Q99928 467 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 BOCQ9BWV1 1114 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 ZDHHC3Q9NYG2 299 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 A0A1W2PQF6 199 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 UBDO15205 165 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 GPC4O75487 556 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 PRNPP04156 253 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 CDK4P11802 303 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 LHCGRP22888 699 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 CA5AP35218 305 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 ATP4BP51164 291 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 CDKL1Q00532 357 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 PRKCQQ04759 706 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 CAMK2GQ13555 558 aaPredicted RBP13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 SQLEQ14534 574 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 MAP7D1Q3KQU3 841 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 NADK2Q4G0N4 442 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 ZNF805Q5CZA5 627 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 CLEC6AQ6EIG7 209 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 SDE2Q6IQ49 451 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 BNC2Q6ZN30 1099 aaPredicted RBP13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 LARP4Q71RC2 724 aaKnown RBP eCLIP13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 PARS2Q7L3T8 475 aaKnown RBP13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 EFL1Q7Z2Z2 1120 aaKnown RBP13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 TRPC4APQ8TEL6 797 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 ARRDC3Q96B67 414 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 CLIP3Q96DZ5 547 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 C19orf60Q96EN9 201 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 C2orf42Q9NWW7 574 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 PKD2L2Q9NZM6 624 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 CD274Q9NZQ7 290 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 B4GALT6Q9UBX8 382 aa13.58□□□□□ -0.24
CSNK1E-201ENST00000359867 BDP1A6H8Y1 2624 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 LRRC14BA6NHZ5 514 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 VILLO15195 856 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 SLC25A14O95258 325 aaPredicted RBP13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 CLPTM1O96005 669 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 TFAP2AP05549 437 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms