RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 MAGIXQ9H6Y5 334 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 PCDHGB6Q9Y5F9 930 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 A0A1W2PQ67 120 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 LOC110117498-PIK3R3F6TDL0 507 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 GOT2P00505 430 aaKnown RBP14.65□□□□□ -0.06
UBAP1-202ENST00000359544 HOXB8P17481 243 aaPredicted RBP14.65□□□□□ -0.06
UBAP1-202ENST00000359544 MSH3P20585 1137 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 IGFBP5P24593 272 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 GGT5P36269 586 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 TGFBR1P36897 503 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 PWP1Q13610 501 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 NEK5Q6P3R8 708 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 CHRDL2Q6WN34 429 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 GATAD2AQ86YP4 633 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 SLC22A15Q8IZD6 547 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 RYBPQ8N488 228 aaPredicted RBP14.65□□□□□ -0.06
UBAP1-202ENST00000359544 ATPAF2Q8N5M1 289 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 KBTBD8Q8NFY9 601 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 PIK3R3Q92569 461 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 FAM162AQ96A26 154 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 IRF2BPLQ9H1B7 796 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 MIR1-1HGQ9H1L0 117 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 FBXL12Q9NXK8 326 aa14.65□□□□□ -0.06
UBAP1-202ENST00000359544 LRRC14BA6NHZ5 514 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 PMPCBO75439 489 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 FYNP06241 537 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 UROSP10746 265 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 RRM2P31350 389 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 IFNA8P32881 189 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 CHRNA4P43681 627 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 GALK2Q01415 458 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 YWHAHQ04917 246 aaPredicted RBP14.64□□□□□ -0.07
UBAP1-202ENST00000359544 MFSD10Q14728 455 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 NKG7Q16617 165 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 PLA2G4EQ3MJ16 856 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 SNAP47Q5SQN1 464 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 SPATC1Q76KD6 591 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 BPHLQ86WA6 291 aaPredicted RBP14.64□□□□□ -0.07
UBAP1-202ENST00000359544 FAM126BQ8IXS8 530 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 SIX5Q8N196 739 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 KCTD13Q8WZ19 329 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 ZNF583Q96ND8 569 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 ZNF599Q96NL3 588 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 DUSP16Q9BY84 665 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 RGS18Q9NS28 235 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 TMEM39AQ9NV64 488 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 EHD3Q9NZN3 535 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 CDH23Q9H251 3354 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 CITO14578 2027 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 SCN1AP35498 2009 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 HBP1O60381 514 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 SCELO95171 688 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 PRKACGP22612 351 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 PPP3CCP48454 512 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 PSEN2P49810 448 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 ANKS6Q68DC2 871 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 GDF6Q6KF10 455 aaPredicted RBP14.64□□□□□ -0.07
UBAP1-202ENST00000359544 RANBP10Q6VN20 620 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 ARHGAP36Q6ZRI8 547 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 PIM3Q86V86 326 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 PROKR1Q8TCW9 393 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 TTC9Q92623 222 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 TNIP3Q96KP6 325 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 FDXACB1Q9BRP7 624 aaPredicted RBP14.64□□□□□ -0.07
UBAP1-202ENST00000359544 CCDC32Q9BV29 185 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 TFB2MQ9H5Q4 396 aaKnown RBP14.64□□□□□ -0.07
UBAP1-202ENST00000359544 STMN3Q9NZ72 180 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 OR12D3Q9UGF7 316 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 COL1A2P08123 1366 aa14.64□□□□□ -0.07
UBAP1-202ENST00000359544 I6L893 689 aaPredicted RBP14.63□□□□□ -0.07
UBAP1-202ENST00000359544 DFFAO00273 331 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 SLC7A4O43246 635 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 PAPSS2O95340 614 aaPredicted RBP14.63□□□□□ -0.07
UBAP1-202ENST00000359544 CLTBP09497 229 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 TRAPPC2P0DI81 140 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 TRAPPC2BP0DI82 140 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 DBTP11182 482 aaKnown RBP14.63□□□□□ -0.07
UBAP1-202ENST00000359544 HOXD8P13378 290 aaPredicted RBP14.63□□□□□ -0.07
UBAP1-202ENST00000359544 MTHFD2P13995 350 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 FDXRP22570 491 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 LMO2P25791 158 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 ETV6P41212 452 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 STARD3Q14849 445 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 DUSP7Q16829 419 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 CEP78Q5JTW2 689 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 SPANXN2Q5MJ10 180 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 TMEM179BQ7Z7N9 219 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 FNDC5Q8NAU1 212 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 JPH3Q8WXH2 748 aaPredicted RBP14.63□□□□□ -0.07
UBAP1-202ENST00000359544 BADQ92934 168 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 PABPC5Q96DU9 382 aaKnown RBP14.63□□□□□ -0.07
UBAP1-202ENST00000359544 SEMA4BQ9NPR2 832 aaPredicted RBP14.63□□□□□ -0.07
UBAP1-202ENST00000359544 GMPPBQ9Y5P6 360 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 H3BRB1 525 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 CAPN5O15484 640 aaPredicted RBP14.63□□□□□ -0.07
UBAP1-202ENST00000359544 CYP2C18P33260 490 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 CTSKP43235 329 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 FCHO2Q0JRZ9 810 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 OR4D1Q15615 310 aa14.63□□□□□ -0.07
UBAP1-202ENST00000359544 HFE2Q6ZVN8 426 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms