RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 KIAA1024LP59773 190 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 CDKL1Q00532 357 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 PHKG1Q16816 387 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 ZNF658BQ4V348 819 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 TCAIMQ8N3R3 496 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 OXR1Q8N573 874 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 OR2L2Q8NH16 312 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 UBTD2Q8WUN7 234 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 ASB11Q8WXH4 323 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 FAR2Q96K12 515 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 HIST1H2AHQ96KK5 128 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 SPACA7Q96KW9 195 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 FOPNLQ96NB1 174 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 HIST1H2AJQ99878 128 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 MYOCQ99972 504 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 H2AFJQ9BTM1 129 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 APOOQ9BUR5 198 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 LGR4Q9BXB1 951 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 SLC12A9Q9BXP2 914 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 PARVBQ9HBI1 364 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 FZD3Q9NPG1 666 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 SPATA6Q9NWH7 488 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 C2orf42Q9NWW7 574 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 DNAJC28Q9NX36 388 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 VTI1BQ9UEU0 232 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 ZMIZ1Q9ULJ6 1067 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 CYP8B1Q9UNU6 501 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 OR1A2Q9Y585 309 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 BPTFQ12830 3046 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 EML5Q05BV3 1969 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 H3BM21 787 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 GFYI3L273 518 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 SLC30A4O14863 429 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 KMOO15229 486 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 GRID2O43424 1007 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 GUCA1CO95843 209 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 HOXC4P09017 264 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 KELP23276 732 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 MAP4P27816 1152 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 PREPP48147 710 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 CCR5P51681 352 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 AP1S2P56377 157 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 CLCQ05315 142 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 IFT88Q13099 833 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 PCBP2Q15366 365 aaKnown RBP eCLIP13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 PLA2G4EQ3MJ16 856 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 SH2D4BQ5SQS7 431 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 KIAA0895LQ68EN5 471 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 METTL2BQ6P1Q9 378 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 C6orf89Q6UWU4 347 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 ATG14Q6ZNE5 492 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 TRPM8Q7Z2W7 1104 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 CUZD1Q86UP6 607 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 AMZ2Q86W34 360 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 RASGRP3Q8IV61 690 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 ZNF547Q8IVP9 402 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 CFAP206Q8IYR0 622 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 AGR3Q8TD06 166 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 MCOLN3Q8TDD5 553 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 ZNF483Q8TF39 744 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 MOCOSQ96EN8 888 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 TOE1Q96GM8 510 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 RMDN2Q96LZ7 410 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 SHCBP1LQ9BZQ2 653 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 KCNK13Q9HB14 408 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 WSB2Q9NYS7 404 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 EIF2B4Q9UI10 523 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 PTBP2Q9UKA9 531 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 PCTPQ9UKL6 214 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 PDE10AQ9Y233 779 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 STK38LQ9Y2H1 464 aa13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 ATXN2Q99700 1313 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-203ENST00000359265 IGHV1OR15-9A0A0B4J2B8 117 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 LRRC14BA6NHZ5 514 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 CCT8L1PA6NM43 557 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 GIPC1O14908 333 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 AXIN1O15169 862 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 HDAC3O15379 428 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 LATO43561 262 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 NDUFS2O75306 463 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 PSIP1O75475 530 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 KIAA0754O94854 1291 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 MATN4O95460 622 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 MLYCDO95822 493 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 HOXA6P31267 233 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 RPIAP49247 311 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 AGTR2P50052 363 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 CDH13P55290 713 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 LCP2Q13094 533 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 RPA4Q13156 261 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 USP39Q53GS9 565 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 TTC23LQ6PF05 361 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 C11orf96Q7Z7L8 435 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 OR56A4Q8NGH8 313 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 STON2Q8WXE9 905 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 DLG3Q92796 817 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 RHBDF1Q96CC6 855 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 TPSD1Q9BZJ3 242 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 PCED1AQ9H1Q7 454 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 DPEP2Q9H4A9 486 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms