RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ANGPTL3Q9Y5C1 460 aa13.2□□□□□ -0.3
CCDC197-201ENST00000359253 CAPN7Q9Y6W3 813 aa13.2□□□□□ -0.3
CCDC197-201ENST00000359253 ANTXRLA6NF34 631 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 LRRC72A6NJI9 287 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 H0YHG0 523 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 H3BM21 787 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 K7ESM1 405 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 KMOO15229 486 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 TAPBPO15533 448 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 LAMTOR5O43504 91 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 RNGTTO60942 597 aaKnown RBP13.19□□□□□ -0.3
CCDC197-201ENST00000359253 POP7O75817 140 aaKnown RBP13.19□□□□□ -0.3
CCDC197-201ENST00000359253 WDR47O94967 919 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 EBLN1P0CF75 366 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 COL9A1P20849 921 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 EPHA3P29320 983 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 DGKEP52429 567 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 ARHGAP8P85298 464 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 ZNF33BQ06732 778 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 HERC3Q15034 1050 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 PHKG1Q16816 387 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 VWA5B1Q5TIE3 1220 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 UNC5DQ6UXZ4 953 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 CHSY3Q70JA7 882 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 SYT13Q7L8C5 426 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 GOLGA7Q7Z5G4 137 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 LRRTM4Q86VH4 590 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 TRIM69Q86WT6 500 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 HEATR4Q86WZ0 1026 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 ARHGAP24Q8N264 748 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 CAMKK1Q8N5S9 505 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 RPLP0P6Q8NHW5 317 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 DLG3Q92796 817 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 ATP6V1E2Q96A05 226 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 FBXL8Q96CD0 374 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 C19orf60Q96EN9 201 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 MRGPRX1Q96LB2 322 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 OR52B2Q96RD2 323 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 SHCBP1LQ9BZQ2 653 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 MMADHCQ9H3L0 296 aaPredicted RBP13.19□□□□□ -0.3
CCDC197-201ENST00000359253 WDR26Q9H7D7 661 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 ZBTB26Q9HCK0 441 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 SEMA4BQ9NPR2 832 aaPredicted RBP13.19□□□□□ -0.3
CCDC197-201ENST00000359253 RIC8BQ9NVN3 520 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC197-201ENST00000359253 TMEM45AQ9NWC5 275 aa13.19□□□□□ -0.3
CCDC197-201ENST00000359253 EIF2B4Q9UI10 523 aaKnown RBP13.19□□□□□ -0.3
CCDC197-201ENST00000359253 MBD1Q9UIS9 605 aaPredicted RBP13.19□□□□□ -0.3
CCDC197-201ENST00000359253 ZFR2Q9UPR6 939 aaKnown RBP13.19□□□□□ -0.3
CCDC197-201ENST00000359253 ZDBF2Q9HCK1 2354 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 PIKFYVEQ9Y2I7 2098 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 TBC1D3DA0A087WVF3 549 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 TBC1D3IA0A087WXS9 549 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 TBC1D3EA0A087X179 549 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 TBC1D3KA0A087X1G2 549 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 CCDC163A0A0D9SF12 145 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 A0A1W2PQU0 124 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 TBC1D3FA6NER0 549 aaPredicted RBP13.18□□□□□ -0.3
CCDC197-201ENST00000359253 TBC1D3LB9A6J9 549 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 MYO1CO00159 1063 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 GUCA1CO95843 209 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 RPN2P04844 631 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 PCCBP05166 539 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 TBC1D3HP0C7X1 549 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 THRAP10827 490 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 MYCLP1P12525 358 aaPredicted RBP13.18□□□□□ -0.3
CCDC197-201ENST00000359253 ZNF8P17098 575 aaPredicted RBP13.18□□□□□ -0.3
CCDC197-201ENST00000359253 NUDT1P36639 197 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 SLC6A12P48065 614 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 AGTR2P50052 363 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 CCNG1P51959 295 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 GRIK2Q13002 908 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 MTAPQ13126 283 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 MAPRE2Q15555 327 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 SPRED3Q2MJR0 410 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 SMU1Q2TAY7 513 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 TBC1D3GQ6DHY5 549 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 NXNQ6DKJ4 435 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 TBC1D3CQ6IPX1 549 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 LARP4Q71RC2 724 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC197-201ENST00000359253 SPATA19Q7Z5L4 167 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 MILR1Q7Z6M3 343 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 AMZ2Q86W34 360 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 PARP9Q8IXQ6 854 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 CFAP206Q8IYR0 622 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 TBC1D3Q8IZP1 549 aaPredicted RBP13.18□□□□□ -0.3
CCDC197-201ENST00000359253 OXR1Q8N573 874 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 TEX9Q8N6V9 391 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 BEND7Q8N7W2 519 aaPredicted RBP13.18□□□□□ -0.3
CCDC197-201ENST00000359253 PHC3Q8NDX5 983 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 OR2T34Q8NGX1 318 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 RP9Q8TA86 221 aaKnown RBP13.18□□□□□ -0.3
CCDC197-201ENST00000359253 TWIST2Q8WVJ9 160 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 NSUN5Q96P11 429 aaKnown RBP13.18□□□□□ -0.3
CCDC197-201ENST00000359253 BTBD10Q9BSF8 475 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 WDR55Q9H6Y2 383 aaPredicted RBP13.18□□□□□ -0.3
CCDC197-201ENST00000359253 NOL11Q9H8H0 719 aaKnown RBP13.18□□□□□ -0.3
CCDC197-201ENST00000359253 IPPKQ9H8X2 491 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 ITM2CQ9NQX7 267 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 ACSS2Q9NR19 701 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms