RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 FAM129BQ96TA1 746 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 EGFL8Q99944 293 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 NEURL2Q9BR09 285 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 SLC6A17Q9H1V8 727 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 ARMC7Q9H6L4 198 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 PKD2L2Q9NZM6 624 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 ZMYM5Q9UJ78 669 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 MUC22E2RYF6 1773 aaPredicted RBP12.39□□□□□ -0.43
GGPS1-202ENST00000358966 RGSL1A5PLK6 1076 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 OR4F21O95013 312 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 KAT7O95251 611 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 SRPRAP08240 638 aaKnown RBP12.39□□□□□ -0.43
GGPS1-202ENST00000358966 ALDOCP09972 364 aaKnown RBP12.39□□□□□ -0.43
GGPS1-202ENST00000358966 RPS3P23396 243 aaKnown RBP eCLIP12.39□□□□□ -0.437e-7■■■■□ 25.3
GGPS1-202ENST00000358966 FCHO2Q0JRZ9 810 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 PLA2G4EQ3MJ16 856 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 ANKS6Q68DC2 871 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 LETMD1Q6P1Q0 360 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 FBXL19Q6PCT2 694 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 NEK10Q6ZWH5 1172 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 YAF2Q8IY57 180 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 MYO1HQ8N1T3 1032 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 RNF148Q8N7C7 305 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 ZNF557Q8N988 423 aaPredicted RBP12.39□□□□□ -0.43
GGPS1-202ENST00000358966 LMNTD1Q8N9Z9 388 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 PYCR2Q96C36 320 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 NOL11Q9H8H0 719 aaKnown RBP12.39□□□□□ -0.43
GGPS1-202ENST00000358966 CCDC167Q9P0B6 97 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 PRR23AA6NEV1 266 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 SYCE1LA8MT33 242 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 FAM47E-STBD1D6RA91 191 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 TNFRSF10AO00220 468 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 AZIN1O14977 448 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 TAPBPO15533 448 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 SGTAO43765 313 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 LAMP2P13473 410 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 PPARGP37231 505 aaPredicted RBP12.39□□□□□ -0.43
GGPS1-202ENST00000358966 PREPP48147 710 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 LCP2Q13094 533 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 RAB30Q15771 203 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 ZXDCQ2QGD7 858 aaPredicted RBP12.39□□□□□ -0.43
GGPS1-202ENST00000358966 HENMT1Q5T8I9 393 aaKnown RBP12.39□□□□□ -0.43
GGPS1-202ENST00000358966 TXNDC11Q6PKC3 985 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 MACC1Q6ZN28 852 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 NUDT8Q8WV74 236 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 AP2M1Q96CW1 435 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 TTC1Q99614 292 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 TMEM245Q9H330 911 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 AKTIPQ9H8T0 292 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 MEAF6Q9HAF1 191 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 THG1LQ9NWX6 298 aaKnown RBP12.39□□□□□ -0.43
GGPS1-202ENST00000358966 VTI1BQ9UEU0 232 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 SERGEFQ9UGK8 458 aa12.39□□□□□ -0.43
GGPS1-202ENST00000358966 WDFY4Q6ZS81 3184 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 PLXNA2O75051 1894 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 STX16-NPEPL1H3BU86 382 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 CYP2A6P11509 494 aaPredicted RBP12.38□□□□□ -0.43
GGPS1-202ENST00000358966 PSMC3P17980 439 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 RCVRNP35243 200 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 HTR6P50406 440 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 NUDT2P50583 147 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 CDC16Q13042 620 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 ZNF423Q2M1K9 1284 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 ATAT1Q5SQI0 421 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 IER5LQ5T953 404 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 CROCCP3Q8IVE0 287 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 CHPFQ8IZ52 775 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 DEFB107AQ8IZN7 70 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 WFIKKN2Q8TEU8 576 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 RCN3Q96D15 328 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 COX4I2Q96KJ9 171 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 NPAS2Q99743 824 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 CLK4Q9HAZ1 481 aaKnown RBP12.38□□□□□ -0.43
GGPS1-202ENST00000358966 DZANK1Q9NVP4 752 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 PPM1HQ9ULR3 514 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 PRKAB1Q9Y478 270 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 HEMK1Q9Y5R4 338 aaPredicted RBP12.38□□□□□ -0.43
GGPS1-202ENST00000358966 TICRRQ7Z2Z1 1910 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 KIAA1549LQ6ZVL6 1849 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 H3BQ06 376 aaPredicted RBP12.38□□□□□ -0.43
GGPS1-202ENST00000358966 CCNT2O60583 730 aaKnown RBP12.38□□□□□ -0.43
GGPS1-202ENST00000358966 CRCPO75575 148 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 ATP1B2P14415 290 aaPredicted RBP12.38□□□□□ -0.43
GGPS1-202ENST00000358966 ITGAXP20702 1163 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 ATXN3P54252 364 aaPredicted RBP12.38□□□□□ -0.43
GGPS1-202ENST00000358966 NR1D2Q14995 579 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 ANKDD1AQ495B1 522 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 ULK2Q8IYT8 1036 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 DDHD1Q8NEL9 900 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 ZFP28Q8NHY6 868 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 ITPKCQ96DU7 683 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 LMAN2LQ9H0V9 348 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 ZNF385DQ9H6B1 395 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 PARVBQ9HBI1 364 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 SLC7A8Q9UHI5 535 aa12.38□□□□□ -0.43
GGPS1-202ENST00000358966 ZFC3H1O60293 1989 aaKnown RBP12.38□□□□□ -0.43
GGPS1-202ENST00000358966 FRYLO94915 3013 aa12.37□□□□□ -0.43
GGPS1-202ENST00000358966 DMDP11532 3685 aa12.37□□□□□ -0.43
GGPS1-202ENST00000358966 TRPC5OSA6NMA1 111 aa12.37□□□□□ -0.43
GGPS1-202ENST00000358966 FFAR3O14843 346 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms