RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CCDC106Q9BWC9 280 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 TMEM138Q9NPI0 162 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 CLEC4AQ9UMR7 237 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 GSAPA4D1B5 854 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 SEPT4O43236 478 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 CREB5Q02930 508 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 PPP1R3AQ16821 1122 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 TMPRSS11AQ6ZMR5 421 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 PARGQ86W56 976 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 RAB43Q86YS6 212 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 OR10Q1Q8NGQ4 319 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 SPACA7Q96KW9 195 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 GMLQ99445 158 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 DEC1Q9P2X7 70 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 HIST1H2ABP04908 130 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 AMD1P17707 334 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 TPTEP56180 551 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 NFKB2Q00653 900 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 RGS1Q08116 209 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 HSPB3Q12988 150 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 TMEM220Q6QAJ8 160 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 KIAA1324Q6UXG2 1013 aaKnown RBP13.48□□□□□ -0.25
VCP-201ENST00000358901 IKBIPQ70UQ0 350 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 HIST3H2AQ7L7L0 130 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 LYSMD3Q7Z3D4 306 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 CILP2Q8IUL8 1156 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 HIST1H2ACQ93077 130 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 DEFB118Q96PH6 123 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 CRTAC1Q9NQ79 661 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 CCDC177Q9NQR7 707 aaPredicted RBP13.48□□□□□ -0.25
VCP-201ENST00000358901 CTPS2Q9NRF8 586 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 ING3Q9NXR8 418 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 SLC27A6Q9Y2P4 619 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 MYH15Q9Y2K3 1946 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 ROBO1Q9Y6N7 1651 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 MYOCOSA0A1B0GUC4 107 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 URADA6NGE7 173 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 CHURC1-FNTBB4DL54 471 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 CNTN5O94779 1100 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 C9P02748 559 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 C8GP07360 202 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 CD36P16671 472 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 NOVP48745 357 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 DIO3P55073 304 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 RGS8P57771 180 aaPredicted RBP13.48□□□□□ -0.25
VCP-201ENST00000358901 CCDC157Q569K6 752 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 KHDRBS2Q5VWX1 349 aaKnown RBP13.48□□□□□ -0.25
VCP-201ENST00000358901 PHYKPLQ8IUZ5 450 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 GINS4Q9BRT9 223 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 DIABLOQ9NR28 239 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 MOCS1Q9NZB8 636 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 ZIM2Q9NZV7 527 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 OAS3Q9Y6K5 1087 aaKnown RBP13.48□□□□□ -0.25
VCP-201ENST00000358901 A0A1W2PPW3 197 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 CLIC1O00299 241 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 TPST2O60704 377 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 EOMESO95936 686 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 PSMD4P55036 377 aaKnown RBP13.47□□□□□ -0.25
VCP-201ENST00000358901 CREMQ03060 361 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 ZNF252P-AS1Q0IIN9 211 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 NPTX1Q15818 432 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 CHST9Q7L1S5 443 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 SNX20Q7Z614 316 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 FLCNQ8NFG4 579 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 C8orf48Q96LL4 319 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 SMOC2Q9H3U7 446 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 C11orf16Q9NQ32 467 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 MCUBQ9NWR8 336 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 ING4Q9UNL4 249 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 EFCAB9A8MZ26 197 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 ATP6V1G1O75348 118 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 CCNB2O95067 398 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 GADD45GO95257 159 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 G6PDP11413 515 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 NDUFA5Q16718 116 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 DPY19L1Q2PZI1 675 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 ADGRF1Q5T601 910 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 PIK3R6Q5UE93 754 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 RBM23Q86U06 439 aaKnown RBP13.47□□□□□ -0.25
VCP-201ENST00000358901 LAPTM4BQ86VI4 370 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 UBE2J2Q8N2K1 259 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 SLC9A6Q92581 669 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 SLC38A4Q969I6 547 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 C11orf24Q96F05 449 aaPredicted RBP13.47□□□□□ -0.25
VCP-201ENST00000358901 FBXL20Q96IG2 436 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 PRKAB1Q9Y478 270 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 GLTPD2A6NH11 291 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 SAGP10523 405 aaPredicted RBP13.47□□□□□ -0.25
VCP-201ENST00000358901 LAMP2P13473 410 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 IL18Q14116 193 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 RFTN1Q14699 578 aaPredicted RBP13.47□□□□□ -0.25
VCP-201ENST00000358901 FAM180AQ6UWF9 173 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 SMG8Q8ND04 991 aaKnown RBP13.47□□□□□ -0.25
VCP-201ENST00000358901 RERGQ96A58 199 aaPredicted RBP13.47□□□□□ -0.25
VCP-201ENST00000358901 HSPBAP1Q96EW2 488 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 PTPN18Q99952 460 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 PREBQ9HCU5 417 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 ZNF221Q9UK13 617 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 PEX16Q9Y5Y5 336 aa13.47□□□□□ -0.25
VCP-201ENST00000358901 KNL1Q8NG31 2342 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms