RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 OR56A4Q8NGH8 313 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 PPTC7Q8NI37 304 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 GTF3C2Q8WUA4 911 aaPredicted RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 ITPAQ9BY32 194 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 RNF39Q9H2S5 420 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 GALPQ9UBC7 116 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 RIMKLBQ9ULI2 386 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 PNMA8BQ9ULN7 279 aaPredicted RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 SLC45A1Q9Y2W3 748 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 CCL27Q9Y4X3 112 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 ASB1Q9Y576 335 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 PCDHGA3Q9Y5H0 932 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 MYBPHLA2RUH7 354 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 M0R082 166 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 ENPP3O14638 875 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 IRAK2O43187 625 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 PAGE1O75459 146 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 WBP4O75554 376 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 LCKP06239 509 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 SERPINF2P08697 491 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 ERVPABLB-1P60509 514 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 CDK10Q15131 360 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 SMN1Q16637 294 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 TPRG1LQ5T0D9 272 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 PPP2R2DQ66LE6 453 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 CCDC81Q6ZN84 652 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 TSPYL5Q86VY4 417 aaPredicted RBP11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 MICU2Q8IYU8 434 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 TEX26Q8N6G2 289 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 CELF2-AS1Q8N7Q2 184 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 ASCC1Q8N9N2 400 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 SIMC1Q8NDZ2 872 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 EMID1Q96A84 441 aaPredicted RBP11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 SDHCQ99643 169 aaPredicted RBP11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 PITX2Q99697 317 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 BARD1Q99728 777 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 MARCH7Q9H992 704 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 KLK14Q9P0G3 267 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 CDC7O00311 574 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 CREG1O75629 220 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 TSPAN12O95859 305 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 ZNF286BP0CG31 522 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 PAX3P23760 479 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 GTF2E2P29084 291 aaKnown RBP11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 KRT20P35900 424 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 HK3P52790 923 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 YWHAHQ04917 246 aaPredicted RBP11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 GRIK4Q16099 956 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 RSBN1Q5VWQ0 802 aaPredicted RBP11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 MRNIPQ6NTE8 343 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 VN1R5Q7Z5H4 357 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 SNX20Q7Z614 316 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 ZNF540Q8NDQ6 660 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 ARRDC2Q8TBH0 407 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 SLC13A3Q8WWT9 602 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 FCGR1BQ92637 280 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 SIK2Q9H0K1 926 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 ZNF221Q9UK13 617 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 AP3M1Q9Y2T2 418 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 PTPRDP23468 1912 aa11.88□□□□□ -0.51
SMARCAL1-201ENST00000357276 TBKBP1A7MCY6 615 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 FAM220BPB1ANY3 271 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 GSTA4O15217 222 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 OR4F21O95013 312 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 SLC25A27O95847 323 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 MZF1P28698 734 aaPredicted RBP11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 PROX2Q3B8N5 592 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 CARD16Q5EG05 197 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 UBXN11Q5T124 520 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 APH1BQ8WW43 257 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 RNF38Q9H0F5 515 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 DKK3Q9UBP4 350 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 ZBBXA8MT70 800 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 CCR1P32246 355 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 RENBPP51606 427 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 PRSS36Q5K4E3 855 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 GJC2Q5T442 439 aaPredicted RBP11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 ZNF544Q6NX49 715 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 LETMD1Q6P1Q0 360 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 FAM162AQ96A26 154 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 ST6GAL2Q96JF0 529 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 NUDT5Q9UKK9 219 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 PCDHGB6Q9Y5F9 930 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 EIF3FO00303 357 aaPredicted RBP11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 CA12O43570 354 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 AIREO43918 545 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 RPP40O75818 363 aaKnown RBP11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 HOXB9P17482 250 aaPredicted RBP11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 HOXD11P31277 338 aaPredicted RBP11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 DDOSTP39656 456 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 KRT6CP48668 564 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 TRPC1P48995 793 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 DSC2Q02487 901 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 ATG9BQ674R7 924 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 TAPT1Q6NXT6 567 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 CEP68Q76N32 757 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 LRRC8DQ7L1W4 858 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 ARRDC4Q8NCT1 418 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 NETO1Q8TDF5 533 aa11.87□□□□□ -0.51
SMARCAL1-201ENST00000357276 PYURFQ96I23 114 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms