RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 LINGO1Q96FE5 620 aa15.15■□□□□ 0.02
TRIM13-201ENST00000356017 ROPN1BQ9BZX4 212 aaPredicted RBP15.15■□□□□ 0.02
TRIM13-201ENST00000356017 ROPN1Q9HAT0 212 aaPredicted RBP15.15■□□□□ 0.02
TRIM13-201ENST00000356017 TLK1Q9UKI8 766 aa15.15■□□□□ 0.02
TRIM13-201ENST00000356017 ZFC3H1O60293 1989 aaKnown RBP15.15■□□□□ 0.02
TRIM13-201ENST00000356017 LILRA5A6NI73 299 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 ZBTB14O43829 449 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 CATP04040 527 aaKnown RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 ALDH4A1P30038 563 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 ACADVLP49748 655 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 E2F1Q01094 437 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 GPR18Q14330 331 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 BEND6Q5SZJ8 279 aaPredicted RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 CYHR1Q6ZMK1 362 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 DCUN1D3Q8IWE4 304 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 OR5AR1Q8NGP9 310 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 WDR48Q8TAF3 677 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 ASB11Q8WXH4 323 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 CCDC3Q9BQI4 270 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 EPB41L1Q9H4G0 881 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 KCNK4Q9NYG8 393 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 DLL3Q9NYJ7 618 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 APOBEC2Q9Y235 224 aaKnown RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 ACOT9Q9Y305 439 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 ARID1BQ8NFD5 2236 aaPredicted RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 A0A087X1B8 175 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 TRIM49D1C9J1S8 452 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 RASGRF2O14827 1237 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 PHGDHO43175 533 aaKnown RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 PSIP1O75475 530 aaKnown RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 RFPL3O75679 317 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 C1orf105O95561 183 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 TSPAN12O95859 305 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 C8GP07360 202 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 HOXD11P31277 338 aaPredicted RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 GPLD1P80108 840 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 SP140Q13342 867 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 ZNF460Q14592 562 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 PLCL1Q15111 1095 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 TAF1BQ53T94 588 aaPredicted RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 DUS1LQ6P1R4 473 aaKnown RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 KLHL35Q6PF15 583 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 TMEM207Q6UWW9 146 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 TIFABQ6ZNK6 161 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 PIWIL4Q7Z3Z4 852 aaKnown RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 CMC1Q7Z7K0 106 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 TBC1D1Q86TI0 1168 aaPredicted RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 RIBC1Q8N443 379 aaPredicted RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 OR10G6Q8NH81 332 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 ISL2Q96A47 359 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 RAD51AP1Q96B01 352 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 UBXN10Q96LJ8 280 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 ABCG4Q9H172 646 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 TFB2MQ9H5Q4 396 aaKnown RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 SNX15Q9NRS6 342 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.14■□□□□ 0.01
TRIM13-201ENST00000356017 PLAAQ9Y263 795 aa15.14■□□□□ 0.01
TRIM13-201ENST00000356017 ARHGEF17Q96PE2 2063 aaPredicted RBP15.13■□□□□ 0.01
TRIM13-201ENST00000356017 GFYI3L273 518 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 SLC16A5O15375 505 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 KCNK5O95279 499 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 WISP3O95389 354 aaPredicted RBP15.13■□□□□ 0.01
TRIM13-201ENST00000356017 ALDOAP04075 364 aaKnown RBP15.13■□□□□ 0.01
TRIM13-201ENST00000356017 SLC35E2BP0CK96 405 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 CCDC166P0CW27 439 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 MAP4P27816 1152 aaKnown RBP15.13■□□□□ 0.01
TRIM13-201ENST00000356017 PGGT1BP53609 377 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 ATP6V0D1P61421 351 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 SIM1P81133 766 aaPredicted RBP15.13■□□□□ 0.01
TRIM13-201ENST00000356017 PRKG2Q13237 762 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 PUM1Q14671 1186 aaKnown RBP eCLIP15.13■□□□□ 0.01
TRIM13-201ENST00000356017 PERM1Q5SV97 790 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 SPRED1Q7Z699 444 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 RAB42Q8N4Z0 105 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 FBXO15Q8NCQ5 510 aaPredicted RBP15.13■□□□□ 0.01
TRIM13-201ENST00000356017 LCN9Q8WX39 176 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 AHCYL2Q96HN2 611 aaKnown RBP15.13■□□□□ 0.01
TRIM13-201ENST00000356017 CABS1Q96KC9 395 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 HGH1Q9BTY7 390 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 TMEM109Q9BVC6 243 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 DERL2Q9GZP9 239 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 TBK1Q9UHD2 729 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 TSR3Q9UJK0 312 aaKnown RBP15.13■□□□□ 0.01
TRIM13-201ENST00000356017 RUVBL2Q9Y230 463 aaKnown RBP15.13■□□□□ 0.01
TRIM13-201ENST00000356017 NFS1Q9Y697 457 aa15.13■□□□□ 0.01
TRIM13-201ENST00000356017 A0A096LPK6 155 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 PRAMEF33A0A0G2JMD5 474 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 FAM221BA6H8Z2 402 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 MPOP05164 745 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 C2P06681 752 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 CYP2A7P20853 494 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 SLCO1A2P46721 670 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 CSRP3P50461 194 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 CLPPQ16740 277 aaPredicted RBP15.12■□□□□ 0.01
TRIM13-201ENST00000356017 UBE2R2Q712K3 238 aaPredicted RBP15.12■□□□□ 0.01
TRIM13-201ENST00000356017 CROCCP2Q86T23 111 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 IQCKQ8N0W5 287 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 Q8N9G6 341 aaPredicted RBP15.12■□□□□ 0.01
TRIM13-201ENST00000356017 OR2W6PQ8NHA6 318 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 MCOLN3Q8TDD5 553 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms