RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 SEC16AO15027 2179 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 SLC1A7O00341 560 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ZBTB24O43167 697 aaPredicted RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 XYLBO75191 536 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 PAK4O96013 591 aaPredicted RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 EPB42P16452 691 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 CHRM3P20309 590 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 LHCGRP22888 699 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ERVK-25P63136 954 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 RGS1Q08116 209 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ZNF543Q08ER8 600 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 BAMBIQ13145 260 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 TMEM44Q2T9K0 475 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 SLC36A3Q495N2 470 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ADNP2Q6IQ32 1131 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 TMEM179Q6ZVK1 233 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 DET1Q7L5Y6 550 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ZNF438Q7Z4V0 828 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 TSPEARQ8WU66 669 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 CD101Q93033 1021 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ANAPC16Q96DE5 110 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 MAP6Q96JE9 813 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 HOXD1Q9GZZ0 328 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 C3orf14Q9HBI5 128 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 MFHAS1Q9Y4C4 1052 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 PLA2G6O60733 806 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 LCP1P13796 627 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 VEGFCP49767 419 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 VEPH1Q14D04 833 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 EXOC3L2Q2M3D2 409 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 CRTC2Q53ET0 693 aaPredicted RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 SH3PXD2AQ5TCZ1 1133 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 MAP1SQ66K74 1059 aaPredicted RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 CGB2Q6NT52 195 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 FBXO42Q6P3S6 717 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 GDPGP1Q6ZNW5 385 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 CBWD2Q8IUF1 395 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 HID1Q8IV36 788 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 HDDC3Q8N4P3 179 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 AGBL3Q8NEM8 1001 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 TTC9Q92623 222 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 KLHL5Q96PQ7 755 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 PCDHB18PQ96TA0 734 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 WACQ9BTA9 647 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 RANGRFQ9HD47 186 aaPredicted RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 ITM2CQ9NQX7 267 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 A3GALT2U3KPV4 340 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ASTN1O14525 1302 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ROBO2Q9HCK4 1378 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 FXYD6-FXYD2A0A087WZ82 144 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 TRAV20A0A0B4J274 112 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 GATCO43716 136 aaKnown RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 GRAP2O75791 330 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 SLC22A5O76082 557 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 CPSF4O95639 269 aaKnown RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 GNALP38405 381 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 RBP5P82980 135 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 PTGR1Q14914 329 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ZBTB6Q15916 424 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 PFKFB4Q16877 469 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 C3P1Q6ZMU1 363 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 MACC1Q6ZN28 852 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ZNF557Q8N988 423 aaPredicted RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 ZFAND1Q8TCF1 268 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 NELL1Q92832 810 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 FXYD6Q9H0Q3 95 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ATXN3LQ9H3M9 355 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 MTG2Q9H4K7 406 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 REEP4Q9H6H4 257 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 GAREM1Q9H706 876 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 SRRDQ9UH36 339 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 PCDHA10Q9Y5I2 948 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 SPATA31A5Q5VU36 1347 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 SPATA31A7Q8IWB4 1347 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ADAM10O14672 748 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 HOXC11O43248 304 aaPredicted RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 DNTTP04053 509 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 NFICP08651 508 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ANXA8P13928 327 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 CERS1P27544 350 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ERVK-21P61565 698 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 CDONQ4KMG0 1287 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 PTRHD1Q6GMV3 140 aaKnown RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 ZNF621Q6ZSS3 439 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ANKS3Q6ZW76 656 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 NAT8LQ8N9F0 302 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ZNF675Q8TD23 568 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 BCL7CQ8WUZ0 217 aaPredicted RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 FBXO8Q9NRD0 319 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 SAE1Q9UBE0 346 aaPredicted RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 BET1O15155 118 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 LCMT2O60294 686 aaKnown RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 SNNO75324 88 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 HMGCRP04035 888 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 JUPP14923 745 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 PRKCAP17252 672 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 GJA1P17302 382 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 CDKN2BP42772 138 aa4.95□□□□□ -1.62
SKP1-202ENST00000353411 GK2Q14410 553 aaPredicted RBP4.95□□□□□ -1.62
SKP1-202ENST00000353411 DUSP7Q16829 419 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms