RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 DPP7Q9UHL4 492 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 HCN2Q9UL51 889 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 LRRK1Q38SD2 2015 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 CCDC162PA2VCL2 907 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 TULP3O75386 442 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 FGF1P05230 155 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 GPIP06744 558 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 C7P10643 843 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 ZNF37AP17032 561 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-204ENST00000353317 LBPP18428 481 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 CAPGP40121 348 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 ZNF140P52738 457 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-204ENST00000353317 ACVR1Q04771 509 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 RPS6KA2Q15349 733 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 PAGE3Q5JUK9 113 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 RETSATQ6NUM9 610 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 TBPL2Q6SJ96 375 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 Q6ZVU0 165 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 DHRSXQ8N5I4 330 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 OR4K2Q8NGD2 314 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 TBC1D15Q8TC07 691 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 BRSK1Q8TDC3 778 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 FRS2Q8WU20 508 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 TANKQ92844 425 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 TMEM74Q96NL1 305 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 ASB2Q96Q27 587 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 ATOH8Q96SQ7 321 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 KXD1Q9BQD3 176 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 PAIP1Q9H074 479 aaKnown RBP8.45□□□□□ -1.06
TRIM55-204ENST00000353317 TBCCD1Q9NVR7 557 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 USP22Q9UPT9 525 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 GPR45Q9Y5Y3 372 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 A0A1W2PP18 115 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 TRIM64BA6NI03 449 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 GOLGA8CPA6NN73 597 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 B4GAT1O43505 415 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 GOT2P00505 430 aaKnown RBP8.44□□□□□ -1.06
TRIM55-204ENST00000353317 INHBBP09529 407 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 ADH5P11766 374 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 IDO1P14902 403 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 HMOX2P30519 316 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 POLR2IP36954 125 aaKnown RBP8.44□□□□□ -1.06
TRIM55-204ENST00000353317 RPS9P46781 194 aaKnown RBP8.44□□□□□ -1.06
TRIM55-204ENST00000353317 ZFP36L2P47974 494 aaKnown RBP8.44□□□□□ -1.06
TRIM55-204ENST00000353317 METAP1P53582 386 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 LIPEQ05469 1076 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 NEDD8Q15843 81 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 CDKN3Q16667 212 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 COQ5Q5HYK3 327 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 C22orf39Q6P5X5 142 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 USP51Q70EK9 711 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 PTRH1Q86Y79 214 aaKnown RBP8.44□□□□□ -1.06
TRIM55-204ENST00000353317 KIAA2013Q8IYS2 634 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 TTC30BQ8N4P2 665 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 OR2AP1Q8NGE2 309 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 OR2A12Q8NGT7 310 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 CDKN2AIPNLQ96HQ2 116 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 CDCA3Q99618 268 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-204ENST00000353317 SLC30A3Q99726 388 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 TRIM54Q9BYV2 358 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 TIMM22Q9Y584 194 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 V9GYQ6 96 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 PLXNB3Q9ULL4 1909 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 MUC22E2RYF6 1773 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-204ENST00000353317 TICRRQ7Z2Z1 1910 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 WASH3PC4AMC7 463 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 BOLA2-SMG1P6H3BVE0 249 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 PGLSO95336 258 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 CTSLP07711 333 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 FCGR1AP12314 374 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 CLCQ05315 142 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 FOXM1Q08050 763 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 BNIP3Q12983 259 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 NFYCQ13952 458 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 RCAN2Q14206 197 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 ZNF829Q3KNS6 432 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-204ENST00000353317 RFLNAQ6ZTI6 216 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 TSPAN33Q86UF1 283 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 PIANPQ8IYJ0 282 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 PAPD5Q8NDF8 572 aaKnown RBP8.44□□□□□ -1.06
TRIM55-204ENST00000353317 SEPHS2Q99611 448 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 KCTD14Q9BQ13 255 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-204ENST00000353317 SEMA4BQ9NPR2 832 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-204ENST00000353317 ERVW-1Q9UQF0 538 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 FNDC3AQ9Y2H6 1198 aaKnown RBP8.44□□□□□ -1.06
TRIM55-204ENST00000353317 ZNF711Q9Y462 761 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 MTCH2Q9Y6C9 303 aa8.44□□□□□ -1.06
TRIM55-204ENST00000353317 GAPDHSO14556 408 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 CD3EAPO15446 510 aaKnown RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 ATP6V1G1O75348 118 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 ZNF182P17025 639 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 MATN1P21941 496 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 UGT1A1P22309 533 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 UGT1A4P22310 534 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 EEF1DP29692 281 aaKnown RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 PRDX3P30048 256 aaKnown RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 TTKP33981 857 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 UGT1A3P35503 534 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 UGT1A5P35504 534 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 PSMD7P51665 324 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms