RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 NT5MQ9NPB1 228 aa7.5□□□□□ -1.21
BRCA1-201ENST00000352993 UBA2Q9UBT2 640 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-201ENST00000352993 LYVE1Q9Y5Y7 322 aa7.5□□□□□ -1.21
BRCA1-201ENST00000352993 SCN1AP35498 2009 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 YJEFN3A6XGL0 299 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 BTN3A1O00481 513 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 TSPAN3O60637 253 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 CD1DP15813 335 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 ATF4P18848 351 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-201ENST00000352993 CA5AP35218 305 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 KRT20P35900 424 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 PPP3CCP48454 512 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 IL18R1Q13478 541 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 ARHGEF6Q15052 776 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 PON2Q15165 354 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 GJC2Q5T442 439 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-201ENST00000352993 GPR153Q6NV75 609 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 SYVN1Q86TM6 617 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 UNC93AQ86WB7 457 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 CILP2Q8IUL8 1156 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 FAM109AQ8N4B1 249 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 ST13P5Q8NFI4 369 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-201ENST00000352993 CLHC1Q8NHS4 586 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 STAG3L4Q8TBR4 150 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 TSPEARQ8WU66 669 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 TNIP3Q96KP6 325 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF583Q96ND8 569 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 SLC30A2Q9BRI3 323 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 CDADC1Q9BWV3 514 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 ZFP14Q9HCL3 533 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 GTF2IRD1Q9UHL9 959 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 ZMYM5Q9UJ78 669 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 SAMHD1Q9Y3Z3 626 aaKnown RBP7.49□□□□□ -1.21
BRCA1-201ENST00000352993 PAPPA2Q9BXP8 1791 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 CLDN24A6NM45 220 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 SNTNA6NMZ2 147 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 TLL1O43897 1013 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 PRSS23O95084 383 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 HLA-DQB2P05538 268 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 SLC2A3P11169 496 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 BMP1P13497 986 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 EPHA2P29317 976 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 PIK3CGP48736 1102 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 GMPSP49915 693 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-201ENST00000352993 ARSDP51689 593 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 PWP1Q13610 501 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 MED22Q15528 200 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 PRSS36Q5K4E3 855 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 PXDC1Q5TGL8 231 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 LAIR1Q6GTX8 287 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 METTL7BQ6UX53 244 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 CAMKK1Q8N5S9 505 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 AADATQ8N5Z0 425 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 GLB1L3Q8NCI6 653 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-201ENST00000352993 ANKK1Q8NFD2 765 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 PJA1Q8NG27 643 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 DHRS9Q9BPW9 319 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 COLEC11Q9BWP8 271 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 DNMT3LQ9UJW3 386 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF214Q9UL59 606 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-201ENST00000352993 OR2A25A4D2G3 310 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 CREG1O75629 220 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 SEMA3DO95025 777 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 GLP2RO95838 553 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 VIPP01282 170 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 CNPP09543 421 aaKnown RBP7.49□□□□□ -1.21
BRCA1-201ENST00000352993 CCNYL3P0C7X3 344 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 AKAP5P24588 427 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 CD86P42081 329 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 RPL38P63173 70 aaKnown RBP7.49□□□□□ -1.21
BRCA1-201ENST00000352993 UBE3AQ05086 875 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 PRKCDQ05655 676 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 AP5B1Q2VPB7 878 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 FAM174BQ3ZCQ3 159 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 GTDC1Q4AE62 458 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 FBXO47Q5MNV8 452 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 OTUD1Q5VV17 481 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-201ENST00000352993 DPY19L3Q6ZPD9 716 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 GPRIN3Q6ZVF9 776 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 ZFAND4Q86XD8 727 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 SLC43A3Q8NBI5 491 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 OR2T11Q8NH01 316 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 LRRC20Q8TCA0 184 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 COPS5Q92905 334 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 CDCA5Q96FF9 252 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 FCRL5Q96RD9 977 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 UCK2Q9BZX2 261 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 GOLGA2P5Q9HBQ8 144 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 TREX1Q9NSU2 369 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 UCKL1Q9NWZ5 548 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 ZIM2Q9NZV7 527 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 TMEFF2Q9UIK5 374 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-201ENST00000352993 IKZF3Q9UKT9 509 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 NAALAD2Q9Y3Q0 740 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 PCDHGB1Q9Y5G3 927 aa7.49□□□□□ -1.21
BRCA1-201ENST00000352993 KLRG2A4D1S0 409 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-201ENST00000352993 NPEPPSL1A6NEC2 478 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 CDC7O00311 574 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 SLC16A6O15403 523 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 UROSP10746 265 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms