RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 KRT6AP02538 564 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 KRT6BP04259 564 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 G6PDP11413 515 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 PSMA4P25789 261 aaKnown RBP10.2□□□□□ -0.78
SMPD4-201ENST00000351288 CCR2P41597 374 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 KRT6CP48668 564 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 INHBCP55103 352 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 OR4D2P58180 307 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 ERVPABLB-1P60509 514 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 MTA1Q13330 715 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 SF1Q15637 639 aaKnown RBP10.2□□□□□ -0.78
SMPD4-201ENST00000351288 CARD16Q5EG05 197 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 TCEAL5Q5H9L2 206 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 NCEH1Q6PIU2 408 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 ELMSAN1Q6PJG2 1045 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 EPHX4Q8IUS5 362 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 KIAA2013Q8IYS2 634 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 LKAAEAR1Q8TD35 194 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 DLG3Q92796 817 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 KIAA1191Q96A73 305 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 AURKBQ96GD4 344 aaPredicted RBP10.2□□□□□ -0.78
SMPD4-201ENST00000351288 HEPHQ9BQS7 1158 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 OR2AG1Q9H205 316 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 ALG2Q9H553 416 aa10.2□□□□□ -0.78
SMPD4-201ENST00000351288 INTS10Q9NVR2 710 aaKnown RBP10.2□□□□□ -0.78
SMPD4-201ENST00000351288 A0A0G2JN53 185 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 WASH4PA8MWX3 477 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 MMP20O60882 483 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 F11P03951 625 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 CTSAP10619 480 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 GPM6BQ13491 265 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 MAPKAPK3Q16644 382 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 GPRC6AQ5T6X5 926 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 TMEM220Q6QAJ8 160 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 GDPD4Q6W3E5 623 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 SNX20Q7Z614 316 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 PHYKPLQ8IUZ5 450 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 RAVER1Q8IY67 606 aaKnown RBP10.19□□□□□ -0.78
SMPD4-201ENST00000351288 SCML4Q8N228 414 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 PARP8Q8N3A8 854 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 L3HYPDHQ96EM0 354 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 PDFQ9HBH1 243 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 EXD2Q9NVH0 621 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 IL17CQ9P0M4 197 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 VPS4AQ9UN37 437 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 SLC7A1P30825 629 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 ZNF140P52738 457 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-201ENST00000351288 RFTN1Q14699 578 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-201ENST00000351288 NEDD8Q15843 81 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 FAM174BQ3ZCQ3 159 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 TCF12Q99081 682 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 TRMOQ9BU70 441 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 TFB2MQ9H5Q4 396 aaKnown RBP10.19□□□□□ -0.78
SMPD4-201ENST00000351288 SLC28A3Q9HAS3 691 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 ASF1AQ9Y294 204 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 LATO43561 262 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 SNAP29O95721 258 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 OTCP00480 354 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 HOXB8P17481 243 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-201ENST00000351288 SLC5A2P31639 672 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 MEF2AQ02078 507 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-201ENST00000351288 PPIGQ13427 754 aaKnown RBP eCLIP10.19□□□□□ -0.788e-7■■■□□ 15.7
SMPD4-201ENST00000351288 LAPTM4AQ15012 233 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 RFTN2Q52LD8 501 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-201ENST00000351288 FAM180BQ6P0A1 224 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 PSRC1Q6PGN9 363 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-201ENST00000351288 TTC33Q6PID6 262 aaPredicted RBP10.19□□□□□ -0.78
SMPD4-201ENST00000351288 TBPL2Q6SJ96 375 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 TMPRSS11BQ86T26 416 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 STK32CQ86UX6 486 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 FAM86B1Q8N7N1 296 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 ITFG1Q8TB96 612 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 DGCR14Q96DF8 476 aaKnown RBP10.19□□□□□ -0.78
SMPD4-201ENST00000351288 ZSWIM3Q96MP5 696 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 TRIB3Q96RU7 358 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 TRIM15Q9C019 465 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 CAPN10Q9HC96 672 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 OGDHLQ9ULD0 1010 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 TMEM98Q9Y2Y6 226 aa10.19□□□□□ -0.78
SMPD4-201ENST00000351288 MYO1DO94832 1006 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 CYP2A7P20853 494 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 ADSLP30566 484 aaPredicted RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 HMGCLP35914 325 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 POLD2P49005 469 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 XIAPP98170 497 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 CHIT1Q13231 466 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 PTCHD3Q3KNS1 767 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 GTDC1Q4AE62 458 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 KANK2Q63ZY3 851 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 SUSD1Q6UWL2 747 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 CERS6Q6ZMG9 384 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 CHERPQ8IWX8 916 aaKnown RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 CD200R1Q8TD46 325 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 SGCDQ92629 289 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 RMND5BQ96G75 393 aaPredicted RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 NSMCE2Q96MF7 247 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 OR52E6Q96RD3 313 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 RPF2Q9H7B2 306 aaKnown RBP10.18□□□□□ -0.78
SMPD4-201ENST00000351288 VCX3AQ9NNX9 186 aa10.18□□□□□ -0.78
SMPD4-201ENST00000351288 SPHK2Q9NRA0 654 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms