RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 CILP2Q8IUL8 1156 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 KIAA1958Q8N8K9 716 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 OR2T11Q8NH01 316 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 ZNF583Q96ND8 569 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 DEPDC7Q96QD5 511 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 SNX18Q96RF0 628 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 TMEM246Q9BRR3 403 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 ZBED2Q9BTP6 218 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 ARHGAP39Q9C0H5 1083 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 ENTPD7Q9NQZ7 604 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 ANGPTL3Q9Y5C1 460 aa18.32■□□□□ 0.52
SCARF1-202ENST00000348987 MKI67P46013 3256 aaKnown RBP18.31■□□□□ 0.52
SCARF1-202ENST00000348987 GSTA4O15217 222 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 VPS4BO75351 444 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 PRR35P0CG20 571 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 DBTP11182 482 aaKnown RBP18.31■□□□□ 0.52
SCARF1-202ENST00000348987 ODC1P11926 461 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 ARSDP51689 593 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 CDK10Q15131 360 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 TPRG1LQ5T0D9 272 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 TUBA3EQ6PEY2 450 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 EID3Q8N140 333 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 SUN5Q8TC36 379 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 FBLIM1Q8WUP2 373 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 CCDC177Q9NQR7 707 aaPredicted RBP18.31■□□□□ 0.52
SCARF1-202ENST00000348987 PLSCR3Q9NRY6 295 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 E9PAM4 449 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 AP3D1O14617 1153 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 HAT1O14929 419 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 HAPLN1P10915 354 aaPredicted RBP18.31■□□□□ 0.52
SCARF1-202ENST00000348987 HTR3AP46098 478 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 OR2B6P58173 313 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 YWHAHQ04917 246 aaPredicted RBP18.31■□□□□ 0.52
SCARF1-202ENST00000348987 ATP6AP1LQ52LC2 224 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 BRINP2Q9C0B6 783 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 ANKHQ9HCJ1 492 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 RGS18Q9NS28 235 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 FBXL12Q9NXK8 326 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 KCTD3Q9Y597 815 aa18.31■□□□□ 0.52
SCARF1-202ENST00000348987 ZNF236Q9UL36 1845 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 FAM234BA2RU67 622 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 PEX11BO96011 259 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 ABCB1P08183 1280 aaPredicted RBP18.3■□□□□ 0.52
SCARF1-202ENST00000348987 HOXC13P31276 330 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 SLC10A7Q0GE19 358 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 GRIK2Q13002 908 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 LCP2Q13094 533 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 LAPTM4AQ15012 233 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 PLEKHG6Q3KR16 790 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 ZFP69Q49AA0 526 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 WDR45BQ5MNZ6 344 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 PNCKQ6P2M8 343 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 C11orf74Q86VG3 221 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 FNDC5Q8NAU1 212 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 ZIC5Q96T25 663 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 PRKD2Q9BZL6 878 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 NT5MQ9NPB1 228 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 SCN3BQ9NY72 215 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 MARCH4Q9P2E8 410 aaPredicted RBP18.3■□□□□ 0.52
SCARF1-202ENST00000348987 ORC6Q9Y5N6 252 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 NYNRINQ9P2P1 1898 aaKnown RBP18.3■□□□□ 0.52
SCARF1-202ENST00000348987 M0QZ92 97 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 CRYZL1O95825 349 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 GRIK1P39086 918 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 CD86P42081 329 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 DGKQP52824 942 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 GNG2P59768 71 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 GALK2Q01415 458 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 ITKQ08881 620 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 PRKG2Q13237 762 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 PIK3R6Q5UE93 754 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 NXNL2Q5VZ03 156 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 KDELC1Q6UW63 502 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 OR2T12Q8NG77 320 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 MED30Q96HR3 178 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 CATSPERBQ9H7T0 1116 aa18.3■□□□□ 0.52
SCARF1-202ENST00000348987 MIA3Q5JRA6 1907 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 A0A1W2PQH9 124 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 CENPXA8MT69 81 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 ZW10O43264 779 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 RGS10O43665 173 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 S1PR4O95977 384 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 JUNDP17535 347 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 CD52P31358 61 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 PTPRCAPQ14761 206 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 CEP78Q5JTW2 689 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 OVOS1Q6IE37 1185 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 ZFAND4Q86XD8 727 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 GALNT12Q8IXK2 581 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 RTL3Q8N8U3 475 aaKnown RBP18.29■□□□□ 0.52
SCARF1-202ENST00000348987 DCBLD1Q8N8Z6 715 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 OR10A6Q8NH74 314 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 OR5K1Q8NHB7 308 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 RHBDF1Q96CC6 855 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 RIBC2Q9H4K1 309 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 NMRK2Q9NPI5 230 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 TRPV2Q9Y5S1 764 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 TNFRSF10BO14763 440 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 ICMTO60725 284 aa18.29■□□□□ 0.52
SCARF1-202ENST00000348987 NPPAP01160 153 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms