RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 SRPRAP08240 638 aaKnown RBP5.09□□□□□ -1.59
VCAM1-202ENST00000347652 ITGA2BP08514 1039 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 ZSCAN5DPP0CG00 497 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 SRCP12931 536 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 ZNF24P17028 368 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 GABRB3P28472 473 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 TPP2P29144 1249 aaPredicted RBP5.09□□□□□ -1.59
VCAM1-202ENST00000347652 EPHA8P29322 1005 aaPredicted RBP5.09□□□□□ -1.59
VCAM1-202ENST00000347652 NPY4RP50391 375 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 SERPINH1P50454 418 aaKnown RBP5.09□□□□□ -1.59
VCAM1-202ENST00000347652 GBX2P52951 348 aaPredicted RBP5.09□□□□□ -1.59
VCAM1-202ENST00000347652 RPP30P78346 268 aaKnown RBP5.09□□□□□ -1.59
VCAM1-202ENST00000347652 TCF15Q12870 199 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 MTAPQ13126 283 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 PTK6Q13882 451 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 EIF4HQ15056 248 aaKnown RBP5.09□□□□□ -1.59
VCAM1-202ENST00000347652 KCTD19Q17RG1 926 aaPredicted RBP5.09□□□□□ -1.59
VCAM1-202ENST00000347652 P3H1Q32P28 736 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 TMEM196Q5HYL7 178 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 PPM1JQ5JR12 505 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 ANKRD20A2Q5SQ80 823 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 FAM182AQ5T1J6 154 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 TMTC4Q5T4D3 741 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 ANKRD20A1Q5TYW2 823 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 MARC1Q5VT66 337 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 ANKRD20A3Q5VUR7 823 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 FAM111BQ6SJ93 734 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 LINGO4Q6UY18 593 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 B3GNT6Q6ZMB0 384 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 GSTA5Q7RTV2 222 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 DSG4Q86SJ6 1040 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 PRUNE1Q86TP1 453 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 HID1Q8IV36 788 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 MAML2Q8IZL2 1156 aaPredicted RBP5.09□□□□□ -1.59
VCAM1-202ENST00000347652 ZNF567Q8N184 647 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 PGBD5Q8N414 524 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 KDM1BQ8NB78 822 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 NSMCE1Q8WV22 266 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 SNX22Q96L94 193 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 WDFY2Q96P53 400 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 PIP5K1AQ99755 562 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 FERMT1Q9BQL6 677 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 LRRC1Q9BTT6 524 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 CEP41Q9BYV8 373 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 SYNDIG1Q9H7V2 258 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 RBM22Q9NW64 420 aaKnown RBP eCLIP5.09□□□□□ -1.59
VCAM1-202ENST00000347652 SLC25A13Q9UJS0 675 aa5.09□□□□□ -1.59
VCAM1-202ENST00000347652 CHTOPQ9Y3Y2 248 aaKnown RBP5.09□□□□□ -1.59
VCAM1-202ENST00000347652 SDK1Q7Z5N4 2213 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 TBC1D3BA6NDS4 549 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 EFCAB8A8MWE9 144 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 C1QTNF9BB2RNN3 333 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 K7ERQ8 282 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 RGS13O14921 159 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 SMAD6O43541 496 aaKnown RBP5.09□□□□□ -1.6
VCAM1-202ENST00000347652 ZNF821O75541 412 aaPredicted RBP5.09□□□□□ -1.6
VCAM1-202ENST00000347652 ALDH1A2O94788 518 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 TMCC1O94876 653 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 KCNK5O95279 499 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 MT-ND5P03915 603 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 AMY2AP04746 511 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 HLA-DQB2P05538 268 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 AMY2BP19961 511 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 DRD1P21728 446 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 CD68P34810 354 aaPredicted RBP5.09□□□□□ -1.6
VCAM1-202ENST00000347652 RPL22P35268 128 aaKnown RBP5.09□□□□□ -1.6
VCAM1-202ENST00000347652 MMP13P45452 471 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 STK19P49842 368 aaPredicted RBP5.09□□□□□ -1.6
VCAM1-202ENST00000347652 CLCN5P51795 746 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 LGALS4P56470 323 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 TUBB4BP68371 445 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 MRPS25P82663 173 aaKnown RBP5.09□□□□□ -1.6
VCAM1-202ENST00000347652 DMWDQ09019 674 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 EPS8Q12929 822 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 EFTUD2Q15029 972 aaKnown RBP eCLIP5.09□□□□□ -1.6
VCAM1-202ENST00000347652 PLA2G2CQ5R387 149 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 KLHL24Q6TFL4 600 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 PET117Q6UWS5 81 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 C4orf22Q6V702 233 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 PPP1R3BQ86XI6 285 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 CCDC110Q8TBZ0 833 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 CYB5D2Q8WUJ1 264 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 SORCS1Q8WY21 1168 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 ISG20Q96AZ6 181 aaKnown RBP5.09□□□□□ -1.6
VCAM1-202ENST00000347652 SLC22A18Q96BI1 424 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 RPL10LQ96L21 214 aaKnown RBP5.09□□□□□ -1.6
VCAM1-202ENST00000347652 PSKH2Q96QS6 385 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 INTS14Q96SY0 518 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 BOCQ9BWV1 1114 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 EVA1AQ9H8M9 152 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 PCDH9Q9HC56 1237 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 CACNA2D2Q9NY47 1150 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 PAK5Q9P286 719 aa5.09□□□□□ -1.6
VCAM1-202ENST00000347652 MUC22E2RYF6 1773 aaPredicted RBP5.08□□□□□ -1.6
VCAM1-202ENST00000347652 IFNL4K9M1U5 179 aa5.08□□□□□ -1.6
VCAM1-202ENST00000347652 MAN2B1O00754 1011 aa5.08□□□□□ -1.6
VCAM1-202ENST00000347652 SPRY1O43609 319 aaPredicted RBP5.08□□□□□ -1.6
VCAM1-202ENST00000347652 OPHN1O60890 802 aa5.08□□□□□ -1.6
VCAM1-202ENST00000347652 NOL3O60936 208 aaKnown RBP5.08□□□□□ -1.6
VCAM1-202ENST00000347652 LILRB5O75023 590 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms