RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 CFAP61Q8NHU2 1237 aa20.97■□□□□ 0.95
TSPAN3-202ENST00000346495 DPEP2Q9H4A9 486 aa20.97■□□□□ 0.95
TSPAN3-202ENST00000346495 SLC32A1Q9H598 525 aa20.97■□□□□ 0.95
TSPAN3-202ENST00000346495 MRGBPQ9NV56 204 aa20.97■□□□□ 0.95
TSPAN3-202ENST00000346495 OR1A2Q9Y585 309 aa20.97■□□□□ 0.95
TSPAN3-202ENST00000346495 ZFC3H1O60293 1989 aaKnown RBP20.97■□□□□ 0.95
TSPAN3-202ENST00000346495 DOCK9Q9BZ29 2069 aa20.97■□□□□ 0.95
TSPAN3-202ENST00000346495 ARHGEF33A8MVX0 844 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 SLC22A2O15244 555 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 DCXO43602 365 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 OR4F21O95013 312 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 MYCLP1P12525 358 aaPredicted RBP20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 EPB42P16452 691 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 PDHA2P29803 388 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 IGFALSP35858 605 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 GDF5P43026 501 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 TPMTP51580 245 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 ERVPABLB-1P60509 514 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 LRRC32Q14392 662 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 AMZ2Q86W34 360 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 HOMEZQ8IX15 550 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 DEFB123Q8N688 67 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 OR52B6Q8NGF0 335 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 FOXJ1Q92949 421 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 FBXL8Q96CD0 374 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 SLC7A6OSQ96CW6 309 aaPredicted RBP20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 KLC4Q9NSK0 619 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 CA14Q9ULX7 337 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 KLHL33A6NCF5 533 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 LRRC72A6NJI9 287 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 PIP5K1BO14986 540 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 KMOO15229 486 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 VPS4BO75351 444 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 KATNA1O75449 491 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 PTPN4P29074 926 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 MAT2AP31153 395 aaKnown RBP20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 ARL1P40616 181 aaPredicted RBP20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 DGKEP52429 567 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 PPP2CBP62714 309 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 PPP2CAP67775 309 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 RPA4Q13156 261 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 PLA2G4EQ3MJ16 856 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 MILR1Q7Z6M3 343 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 TRIM69Q86WT6 500 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 DDIASQ8IXT1 998 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 OXR1Q8N573 874 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 FBXO15Q8NCQ5 510 aaPredicted RBP20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 OR2T34Q8NGX1 318 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 ATL1Q8WXF7 558 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 CCDC138Q96M89 665 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 CCT7Q99832 543 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 BTBD1Q9H0C5 482 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 ZNF385DQ9H6B1 395 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 ITM2CQ9NQX7 267 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 ARHGEF3Q9NR81 526 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 MRPS17Q9Y2R5 130 aaKnown RBP20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 TIMM22Q9Y584 194 aa20.96■□□□□ 0.95
TSPAN3-202ENST00000346495 CHURC1-FNTBB4DL54 471 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 MYO1CO00159 1063 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 PRDX6P30041 224 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 SLC6A12P48065 614 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 TRAF3Q13114 568 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 KLF10Q13118 480 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 NFE2L1Q14494 772 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 HABP4Q5JVS0 413 aaKnown RBP20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 LETMD1Q6P1Q0 360 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 XKR5Q6UX68 686 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 Q6ZS52 159 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 CHSY3Q70JA7 882 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 LARP4Q71RC2 724 aaKnown RBP eCLIP20.95■□□□□ 0.947e-7■□□□□ 8.8
TSPAN3-202ENST00000346495 CDYL2Q8N8U2 506 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 OR4F6Q8NGB9 312 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 HMGB4Q8WW32 186 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 CMTM5Q96DZ9 223 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 CATSPER2Q96P56 530 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 NTMT1Q9BV86 223 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 TUBB1Q9H4B7 451 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 RMI1Q9H9A7 625 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 SGK2Q9HBY8 427 aa20.95■□□□□ 0.94
TSPAN3-202ENST00000346495 H0YHG0 523 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 SLC31A1O15431 190 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 TMEM198Q66K66 360 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 SYT13Q7L8C5 426 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 ZNF687Q8N1G0 1237 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 DENND6BQ8NEG7 585 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 FLCNQ8NFG4 579 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 METTL6Q8TCB7 284 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 C3orf30Q96M34 536 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 CDK15Q96Q40 435 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 APOOQ9BUR5 198 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 LMAN1LQ9HAT1 526 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 CD93Q9NPY3 652 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 G3BP2Q9UN86 482 aaKnown RBP20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 PRKAB1Q9Y478 270 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 PCYT1BQ9Y5K3 369 aaPredicted RBP20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 ST14Q9Y5Y6 855 aa20.94■□□□□ 0.94
TSPAN3-202ENST00000346495 CACNB4O00305 520 aaPredicted RBP20.93■□□□□ 0.94
TSPAN3-202ENST00000346495 WDR47O94967 919 aa20.93■□□□□ 0.94
TSPAN3-202ENST00000346495 C1orf105O95561 183 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms