RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 FMO4P31512 558 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 HALP42357 657 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 GPR3P46089 330 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 FASLGP48023 281 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 LEPRP48357 1165 aaKnown RBP13.49□□□□□ -0.25
TPM4-202ENST00000344824 LSSP48449 732 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 LIMK2P53671 638 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 MAPK10P53779 464 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 GPS2Q13227 327 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 NFE2L1Q14494 772 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 TBC1D25Q3MII6 688 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 GPR33Q49SQ1 333 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 HSP90B2PQ58FF3 399 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 TTMPQ5BVD1 217 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 RBM20Q5T481 1227 aaKnown RBP13.49□□□□□ -0.25
TPM4-202ENST00000344824 LGSNQ5TDP6 509 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 C19orf48Q6RUI8 117 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 C11orf96Q7Z7L8 435 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 AMZ2Q86W34 360 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 LSMEM2Q8N112 164 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 FBXO39Q8N4B4 442 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 ACVR1CQ8NER5 493 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 OR10G6Q8NH81 332 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 DTX3LQ8TDB6 740 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 LIN37Q96GY3 246 aaPredicted RBP13.49□□□□□ -0.25
TPM4-202ENST00000344824 TTC1Q99614 292 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 COPS8Q99627 209 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 SH3GL2Q99962 352 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 TBC1D10AQ9BXI6 508 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 SEMA6CQ9H3T2 930 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 RHOJQ9H4E5 214 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 CAB39LQ9H9S4 337 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 INTS10Q9NVR2 710 aaKnown RBP13.49□□□□□ -0.25
TPM4-202ENST00000344824 EURLQ9NYK6 297 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 KLHL3Q9UH77 587 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 LGALS13Q9UHV8 139 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 SLC39A10Q9ULF5 831 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 NOVA2Q9UNW9 492 aaKnown RBP13.49□□□□□ -0.25
TPM4-202ENST00000344824 ZFHX4Q86UP3 3567 aa13.49□□□□□ -0.25
TPM4-202ENST00000344824 TRBV5-4A0A0C4DH59 114 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 FAM95CA0A1B0GW59 222 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 A0A1W2PNU3 283 aaPredicted RBP13.48□□□□□ -0.25
TPM4-202ENST00000344824 A0A1W2PPM1 405 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 A6NCN8 305 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 OR5K4A6NMS3 321 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 TMX2-CTNND1H3BSU7 103 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 PLD2O14939 933 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 POP7O75817 140 aaKnown RBP13.48□□□□□ -0.25
TPM4-202ENST00000344824 TNFSF15O95150 251 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 SYF2O95926 243 aaKnown RBP13.48□□□□□ -0.25
TPM4-202ENST00000344824 ITIH1P19827 911 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 CCKBRP32239 447 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 CSF2RBP32927 897 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 PPARGP37231 505 aaPredicted RBP13.48□□□□□ -0.25
TPM4-202ENST00000344824 CLCNKAP51800 687 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 PGGT1BP53609 377 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 PCBP4P57723 403 aaKnown RBP13.48□□□□□ -0.25
TPM4-202ENST00000344824 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.48□□□□□ -0.25
TPM4-202ENST00000344824 RNF187Q5TA31 235 aaPredicted RBP13.48□□□□□ -0.25
TPM4-202ENST00000344824 LYPLAL1Q5VWZ2 237 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 CERS6Q6ZMG9 384 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 LRRC69Q6ZNQ3 347 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 SLITRK4Q8IW52 837 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 LPGAT1Q92604 370 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 SH3KBP1Q96B97 665 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 FAM136AQ96C01 138 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 GRAMD1AQ96CP6 724 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 CCDC74BQ96LY2 380 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 TCF12Q99081 682 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 CCDC68Q9H2F9 335 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 THSD1Q9NS62 852 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 ZDHHC3Q9NYG2 299 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 AKAP7Q9P0M2 348 aaPredicted RBP13.48□□□□□ -0.25
TPM4-202ENST00000344824 TMEM9Q9P0T7 183 aa13.48□□□□□ -0.25
TPM4-202ENST00000344824 CFAP20Q9Y6A4 193 aaKnown RBP13.48□□□□□ -0.25
TPM4-202ENST00000344824 HMX2A2RU54 273 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 H3BQF6 201 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 GOLGA8RI6L899 631 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 MT-ND3P03897 115 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 ITGB6P18564 788 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 CNTFP26441 200 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 CD1CP29017 333 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 ATP5DP30049 168 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 GPLD1P80108 840 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 USP10Q14694 798 aaKnown RBP13.47□□□□□ -0.25
TPM4-202ENST00000344824 NR1D2Q14995 579 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 ZNF549Q6P9A3 640 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 FAM83HQ6ZRV2 1179 aaPredicted RBP13.47□□□□□ -0.25
TPM4-202ENST00000344824 CMC1Q7Z7K0 106 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 SPNS2Q8IVW8 549 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 SRRM1Q8IYB3 904 aaKnown RBP13.47□□□□□ -0.25
TPM4-202ENST00000344824 AVL9Q8NBF6 648 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 NCSTNQ92542 709 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 FGF11Q92914 225 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 PGM2Q96G03 612 aa13.47□□□□□ -0.25
TPM4-202ENST00000344824 ZNF514Q96K75 400 aaPredicted RBP13.47□□□□□ -0.25
TPM4-202ENST00000344824 ZNF578Q96N58 590 aaPredicted RBP13.47□□□□□ -0.25
TPM4-202ENST00000344824 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.47□□□□□ -0.25
TPM4-202ENST00000344824 IMP3Q9NV31 184 aaKnown RBP13.47□□□□□ -0.25
TPM4-202ENST00000344824 VPS9D1Q9Y2B5 631 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms