RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 SLC12A9Q9BXP2 914 aa17.56■□□□□ 0.4
USF2-202ENST00000343550 ASH1LQ9NR48 2969 aaKnown RBP17.56■□□□□ 0.4
USF2-202ENST00000343550 HEMK1Q9Y5R4 338 aaPredicted RBP17.56■□□□□ 0.4
USF2-202ENST00000343550 SDK2Q58EX2 2172 aa17.56■□□□□ 0.4
USF2-202ENST00000343550 SETXQ7Z333 2677 aaKnown RBP17.55■□□□□ 0.4
USF2-202ENST00000343550 TYRP1P17643 537 aa17.55■□□□□ 0.4
USF2-202ENST00000343550 PGAM1P18669 254 aa17.55■□□□□ 0.4
USF2-202ENST00000343550 OGNP20774 298 aaKnown RBP17.55■□□□□ 0.4
USF2-202ENST00000343550 RPS3P23396 243 aaKnown RBP eCLIP17.55■□□□□ 0.4
USF2-202ENST00000343550 CCR7P32248 378 aa17.55■□□□□ 0.4
USF2-202ENST00000343550 MAPK9P45984 424 aa17.55■□□□□ 0.4
USF2-202ENST00000343550 LONRF1Q17RB8 773 aa17.55■□□□□ 0.4
USF2-202ENST00000343550 BBS9Q3SYG4 887 aa17.55■□□□□ 0.4
USF2-202ENST00000343550 CENPUQ71F23 418 aa17.55■□□□□ 0.4
USF2-202ENST00000343550 LRRC6Q86X45 466 aa17.55■□□□□ 0.4
USF2-202ENST00000343550 CACNA2D3Q8IZS8 1091 aa17.55■□□□□ 0.4
USF2-202ENST00000343550 BIRC8Q96P09 236 aa17.55■□□□□ 0.4
USF2-202ENST00000343550 NAT9Q9BTE0 207 aa17.55■□□□□ 0.4
USF2-202ENST00000343550 C20orf96Q9NUD7 363 aaPredicted RBP17.55■□□□□ 0.4
USF2-202ENST00000343550 COLEC10Q9Y6Z7 277 aa17.55■□□□□ 0.4
USF2-202ENST00000343550 BHMG1C9JSJ3 638 aaPredicted RBP17.54■□□□□ 0.4
USF2-202ENST00000343550 KIF2AO00139 706 aaPredicted RBP17.54■□□□□ 0.4
USF2-202ENST00000343550 PFDN6O15212 129 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 TTC4O95801 387 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 S1PR4O95977 384 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 LIFP15018 202 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 AMD1P17707 334 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 ADARP55265 1226 aaKnown RBP17.54■□□□□ 0.4
USF2-202ENST00000343550 MC2RQ01718 297 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 PLOD1Q02809 727 aaPredicted RBP17.54■□□□□ 0.4
USF2-202ENST00000343550 CKAP4Q07065 602 aaKnown RBP17.54■□□□□ 0.4
USF2-202ENST00000343550 THOC5Q13769 683 aaKnown RBP17.54■□□□□ 0.4
USF2-202ENST00000343550 HP1BP3Q5SSJ5 553 aaPredicted RBP17.54■□□□□ 0.4
USF2-202ENST00000343550 DUPD1Q68J44 220 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 PTRHD1Q6GMV3 140 aaKnown RBP17.54■□□□□ 0.4
USF2-202ENST00000343550 DUS1LQ6P1R4 473 aaKnown RBP17.54■□□□□ 0.4
USF2-202ENST00000343550 UNC5BQ8IZJ1 945 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 KRT222Q8N1A0 295 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.54■□□□□ 0.4
USF2-202ENST00000343550 BBOF1Q8ND07 529 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 PHC3Q8NDX5 983 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 LKAAEAR1Q8TD35 194 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 LPGAT1Q92604 370 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 TEFMQ96QE5 360 aaKnown RBP17.54■□□□□ 0.4
USF2-202ENST00000343550 TSSK1BQ9BXA7 367 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 PILRAQ9UKJ1 303 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 CRYL1Q9Y2S2 319 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 HEBP2Q9Y5Z4 205 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 TEX264Q9Y6I9 313 aa17.54■□□□□ 0.4
USF2-202ENST00000343550 UBA6A0AVT1 1052 aaPredicted RBP17.53■□□□□ 0.4
USF2-202ENST00000343550 IFRD1O00458 451 aaPredicted RBP17.53■□□□□ 0.4
USF2-202ENST00000343550 RAD1O60671 282 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 GPC4O75487 556 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 AOAHP28039 575 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 ACADLP28330 430 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 FMO4P31512 558 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 ELK3P41970 407 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 EIF3BP55884 814 aaKnown RBP17.53■□□□□ 0.4
USF2-202ENST00000343550 ARL4CP56559 192 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 KCNC4Q03721 635 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 CBLBQ13191 982 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 CTBP1Q13363 440 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 BOP1Q14137 746 aaKnown RBP17.53■□□□□ 0.4
USF2-202ENST00000343550 CRYMQ14894 314 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 HIF1AQ16665 826 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 WHAMMP3Q1A5X7 153 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 ZNF789Q5FWF6 425 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 RNF187Q5TA31 235 aaPredicted RBP17.53■□□□□ 0.4
USF2-202ENST00000343550 PLXDC1Q8IUK5 500 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 DENND6AQ8IWF6 608 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 LMNTD2Q8IXW0 634 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 TFGQ92734 400 aaPredicted RBP17.53■□□□□ 0.4
USF2-202ENST00000343550 LRRC39Q96DD0 335 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 FERD3LQ96RJ6 166 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 CTRCQ99895 268 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 DPH5Q9H2P9 285 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 CLMPQ9H6B4 373 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 KIR3DX1Q9H7L2 352 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 WHRNQ9P202 907 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 SLC24A2Q9UI40 661 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 GNPTGQ9UJJ9 305 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 CDYLQ9Y232 598 aa17.53■□□□□ 0.4
USF2-202ENST00000343550 NDC80O14777 642 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 WISP1O95388 367 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 NDUFS1P28331 727 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 HSPA14Q0VDF9 509 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 KRT33BQ14525 404 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 HSP90AA5PQ58FG0 334 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 SPANXN3Q5MJ09 141 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 CTSL3PQ5NE16 218 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 ZNF470Q6ECI4 717 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 CALML6Q8TD86 181 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 ASZ1Q8WWH4 475 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 PANX3Q96QZ0 392 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 WDR83Q9BRX9 315 aaKnown RBP17.52■□□□□ 0.4
USF2-202ENST00000343550 ZPBPQ9BS86 351 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 SPRY4Q9C004 299 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 PLAC1Q9HBJ0 212 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 FBXO8Q9NRD0 319 aa17.52■□□□□ 0.4
USF2-202ENST00000343550 INTS10Q9NVR2 710 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms