RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 PHC3Q8NDX5 983 aa15.79■□□□□ 0.12
NECTIN1-202ENST00000340882 DTX3LQ8TDB6 740 aa15.79■□□□□ 0.12
NECTIN1-202ENST00000340882 FERD3LQ96RJ6 166 aa15.79■□□□□ 0.12
NECTIN1-202ENST00000340882 C17orf62Q9BQA9 187 aa15.79■□□□□ 0.12
NECTIN1-202ENST00000340882 CHST11Q9NPF2 352 aa15.79■□□□□ 0.12
NECTIN1-202ENST00000340882 AIPL1Q9NZN9 384 aa15.79■□□□□ 0.12
NECTIN1-202ENST00000340882 TRGV8A0A0C4DH27 118 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 GLYATL1P3A0A0U1RQE8 302 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 CCL21O00585 134 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 MSH3P20585 1137 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 AKT1P31749 480 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 KIRREL2Q6UWL6 708 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 NPNTQ6UXI9 565 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 ZNF808Q8N4W9 903 aaPredicted RBP15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 C19orf47Q8N9M1 422 aaKnown RBP15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 OR52E1Q8NGJ3 308 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 PROKR1Q8TCW9 393 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 TRIM56Q9BRZ2 755 aaKnown RBP15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 AP1M1Q9BXS5 423 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 GLOD4Q9HC38 313 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 ACTR10Q9NZ32 417 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 HEY1Q9Y5J3 304 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 HS3ST3B1Q9Y662 390 aa15.78■□□□□ 0.12
NECTIN1-202ENST00000340882 ZNF469Q96JG9 3925 aaPredicted RBP15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 WISP2O76076 250 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 MMP11P24347 488 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 KLHL30Q0D2K2 578 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 PDK2Q15119 407 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 HADHQ16836 314 aaKnown RBP15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 LONRF2Q1L5Z9 754 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 VWA2Q5GFL6 755 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 SIRPB2Q5JXA9 342 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 FCRL6Q6DN72 434 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 RPUSD3Q6P087 351 aaKnown RBP15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 GFRALQ6UXV0 394 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 SHISA6Q6ZSJ9 500 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 SLC25A41Q8N5S1 370 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 OR1N1Q8NGS0 311 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 COG1Q8WTW3 980 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 RAPGEF5Q92565 580 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 NR4A3Q92570 626 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 MAGEB10Q96LZ2 347 aaPredicted RBP15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 RNF157Q96PX1 679 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 SMOXQ9NWM0 555 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 SH3BGRL2Q9UJC5 107 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 AP1M2Q9Y6Q5 423 aa15.77■□□□□ 0.12
NECTIN1-202ENST00000340882 CPAMD8Q8IZJ3 1885 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 LOC285095A0A1B0GVY8 99 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 C2orf74A8MZ97 194 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 ZSCAN9O15535 394 aaPredicted RBP15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 MAP3K7O43318 606 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 CYP1A2P05177 515 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 CD63P08962 238 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 CDK11BP21127 795 aaKnown RBP15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 MST1P26927 711 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 CD68P34810 354 aaPredicted RBP15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 KIR3DL1P43629 444 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 ADORA2A-AS1P86434 159 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 PRKG2Q13237 762 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 SLC14A2Q15849 920 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 BCL7AQ4VC05 210 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 CCDC70Q6NSX1 233 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 SPESP1Q6UW49 350 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 KDELC1Q6UW63 502 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 MICALCLQ6ZW33 695 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 AMIGO1Q86WK6 493 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 ANKRD20A12PQ8NF67 263 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 FLVCR1-AS1Q8TAF5 88 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 ZNF398Q8TD17 642 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 N4BP2L2Q92802 583 aaPredicted RBP15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 RBM41Q96IZ5 413 aaKnown RBP15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 THOC3Q96J01 351 aaKnown RBP15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 LINC00615Q96LM1 132 aaPredicted RBP15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 SRPK1Q96SB4 655 aaKnown RBP15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 LHPPQ9H008 270 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 TFB2MQ9H5Q4 396 aaKnown RBP15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 EPS8L2Q9H6S3 715 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 SUCOQ9UBS9 1254 aaKnown RBP15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 CDC23Q9UJX2 597 aa15.76■□□□□ 0.11
NECTIN1-202ENST00000340882 MYO1FO00160 1098 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 HOXB4P17483 251 aaPredicted RBP15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 PDHA2P29803 388 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 CA7P43166 264 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 GCGRP47871 477 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 WNT3AP56704 352 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 MFAP5Q13361 173 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 ITGA9Q13797 1035 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 ISLR2Q6UXK2 745 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 COX15Q7KZN9 410 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 CDH24Q86UP0 819 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 FAM20CQ8IXL6 584 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 BLOC1S5Q8TDH9 187 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 OLFM3Q96PB7 478 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 OR2A14Q96R47 310 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 SPSB2Q99619 263 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 HGH1Q9BTY7 390 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 OR52A5Q9H2C5 316 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 TRABDQ9H4I3 376 aa15.75■□□□□ 0.11
NECTIN1-202ENST00000340882 TXLNGQ9NUQ3 528 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms