RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PHC3Q8NDX5 983 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 OR4E2Q8NGC2 313 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 OR52E1Q8NGJ3 308 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 OR5AR1Q8NGP9 310 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 OR5K2Q8NHB8 316 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 USP7Q93009 1102 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 BIRC8Q96P09 236 aa18.67■□□□□ 0.58
SYNE4-202ENST00000340477 TEFMQ96QE5 360 aaKnown RBP18.67■□□□□ 0.58
SYNE4-202ENST00000340477 ZNF768Q9H5H4 540 aaKnown RBP18.67■□□□□ 0.58
SYNE4-202ENST00000340477 TFB2MQ9H5Q4 396 aaKnown RBP18.67■□□□□ 0.58
SYNE4-202ENST00000340477 FBXO6Q9NRD1 293 aaPredicted RBP18.67■□□□□ 0.58
SYNE4-202ENST00000340477 TDRKHQ9Y2W6 561 aaKnown RBP18.67■□□□□ 0.58
SYNE4-202ENST00000340477 URB1O60287 2271 aaKnown RBP18.66■□□□□ 0.58
SYNE4-202ENST00000340477 GSAPA4D1B5 854 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 TLCD2A6NGC4 264 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 BHMG1C9JSJ3 638 aaPredicted RBP18.66■□□□□ 0.58
SYNE4-202ENST00000340477 MAP3K7O43318 606 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 NIPSNAP2O75323 286 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 GPC4O75487 556 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 CCL4P13236 92 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 ACADLP28330 430 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 ETV5P41161 510 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 ABCG1P45844 678 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 SEPHS1P49903 392 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 MRPS25P82663 173 aaKnown RBP18.66■□□□□ 0.58
SYNE4-202ENST00000340477 CAV1Q03135 178 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 PDIA2Q13087 525 aaKnown RBP18.66■□□□□ 0.58
SYNE4-202ENST00000340477 PRKG2Q13237 762 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 CTBP1Q13363 440 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 BROXQ5VW32 411 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 CEACAM20Q6UY09 585 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 AMIGO1Q86WK6 493 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 CARFQ8N187 725 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 RAB42Q8N4Z0 105 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 CFAP61Q8NHU2 1237 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 KIF18AQ8NI77 898 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 ART4Q93070 314 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 CERS2Q96G23 380 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 DDA1Q9BW61 102 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 DPH1Q9BZG8 443 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 WDR70Q9NW82 654 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 FBXO5Q9UKT4 447 aa18.66■□□□□ 0.58
SYNE4-202ENST00000340477 A0A087WV48 116 aa18.65■□□□□ 0.58
SYNE4-202ENST00000340477 PRAMEF10O60809 474 aa18.65■□□□□ 0.58
SYNE4-202ENST00000340477 SLCO2B1O94956 709 aa18.65■□□□□ 0.58
SYNE4-202ENST00000340477 S1PR4O95977 384 aa18.65■□□□□ 0.58
SYNE4-202ENST00000340477 FGF3P11487 239 aaPredicted RBP18.65■□□□□ 0.58
SYNE4-202ENST00000340477 POLR2CP19387 275 aaPredicted RBP18.65■□□□□ 0.58
SYNE4-202ENST00000340477 ATP5DP30049 168 aa18.65■□□□□ 0.58
SYNE4-202ENST00000340477 HP1BP3Q5SSJ5 553 aaPredicted RBP18.65■□□□□ 0.58
SYNE4-202ENST00000340477 KIAA0408Q6ZU52 694 aa18.65■□□□□ 0.58
SYNE4-202ENST00000340477 KMT5CQ86Y97 462 aa18.65■□□□□ 0.58
SYNE4-202ENST00000340477 DCUN1D3Q8IWE4 304 aa18.65■□□□□ 0.58
SYNE4-202ENST00000340477 ZBTB2Q8N680 514 aa18.65■□□□□ 0.58
SYNE4-202ENST00000340477 NAF1Q96HR8 494 aaKnown RBP18.65■□□□□ 0.58
SYNE4-202ENST00000340477 ZPBPQ9BS86 351 aa18.65■□□□□ 0.58
SYNE4-202ENST00000340477 OCIAD1Q9NX40 245 aa18.65■□□□□ 0.58
SYNE4-202ENST00000340477 PCDHGA3Q9Y5H0 932 aa18.65■□□□□ 0.58
SYNE4-202ENST00000340477 TEX264Q9Y6I9 313 aa18.65■□□□□ 0.58
SYNE4-202ENST00000340477 C2orf74A8MZ97 194 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 POLR1CO15160 346 aaPredicted RBP18.64■□□□□ 0.57
SYNE4-202ENST00000340477 ERVK-10P10266 1014 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 MPP1Q00013 466 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 MC2RQ01718 297 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 FOXM1Q08050 763 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 ABRQ12979 859 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 UNC5AQ6ZN44 842 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 ANKMY2Q8IV38 441 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 ZBED8Q8IZ13 594 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 SIDT2Q8NBJ9 832 aaKnown RBP18.64■□□□□ 0.57
SYNE4-202ENST00000340477 FBXO36Q8NEA4 188 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 MAGEC3Q8TD91 643 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 KCNJ9Q92806 393 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 FAM136AQ96C01 138 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 PWWP2AQ96N64 755 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 ACSL6Q9UKU0 697 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 CDYLQ9Y232 598 aa18.64■□□□□ 0.57
SYNE4-202ENST00000340477 STMND1H3BQB6 276 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 EIF3HO15372 352 aaKnown RBP eCLIP18.63■□□□□ 0.57
SYNE4-202ENST00000340477 KLK10O43240 276 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 KIF1CO43896 1103 aaKnown RBP18.63■□□□□ 0.57
SYNE4-202ENST00000340477 VPS26AO75436 327 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 LIPCP11150 499 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 CDH3P22223 829 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 CCNFP41002 786 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 CARSP49589 748 aaKnown RBP18.63■□□□□ 0.57
SYNE4-202ENST00000340477 UCNP55089 124 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 PPP1CAP62136 330 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 ZNF789Q5FWF6 425 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 TMTC4Q5T4D3 741 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 STEAP4Q687X5 459 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 DUPD1Q68J44 220 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 UGT3A1Q6NUS8 523 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 VRK3Q8IV63 474 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 IGDCC3Q8IVU1 814 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 C2CD4AQ8NCU7 369 aaPredicted RBP18.63■□□□□ 0.57
SYNE4-202ENST00000340477 MAP3K3Q99759 626 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 RAB11FIP5Q9BXF6 653 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 FBXO8Q9NRD0 319 aa18.63■□□□□ 0.57
SYNE4-202ENST00000340477 SOHLH2Q9NX45 425 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms