RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 AHSA2Q719I0 299 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 SLC46A3Q7Z3Q1 461 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 RAB43Q86YS6 212 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 RIOX2Q8IUF8 465 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 CCDC71Q8IV32 467 aaPredicted RBP9.23□□□□□ -0.93
NECAP1-201ENST00000339754 OR8J3Q8NGG0 315 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 IPCEF1Q8WWN9 437 aaPredicted RBP9.23□□□□□ -0.93
NECAP1-201ENST00000339754 PABPC5Q96DU9 382 aaKnown RBP9.23□□□□□ -0.93
NECAP1-201ENST00000339754 CCDC32Q9BV29 185 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 PRKD2Q9BZL6 878 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 ACTL8Q9H568 366 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 C12orf10Q9HB07 376 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 VAPAQ9P0L0 249 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 NDRG4Q9ULP0 352 aaKnown RBP9.23□□□□□ -0.93
NECAP1-201ENST00000339754 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.23□□□□□ -0.93
NECAP1-201ENST00000339754 ADAMTS5Q9UNA0 930 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 TRAPPC4Q9Y296 219 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 PCDHGB2Q9Y5G2 931 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 LYVE1Q9Y5Y7 322 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 SBF1O95248 1867 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 RLFQ13129 1914 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 PMPCBO75439 489 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 PTPRAP18433 802 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 PIK3CBP42338 1070 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 AIF1P55008 147 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 PLIN5Q00G26 463 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 SLAMF1Q13291 335 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 FAM187BQ17R55 369 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 ATP6AP1LQ52LC2 224 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 FBXO48Q5FWF7 155 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 SPANXN2Q5MJ10 180 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 CPZQ66K79 652 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 EFCAB12Q6NXP0 572 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 SHQ1Q6PI26 577 aaKnown RBP9.23□□□□□ -0.93
NECAP1-201ENST00000339754 DET1Q7L5Y6 550 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 GALNT7Q86SF2 657 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 SYVN1Q86TM6 617 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 HORMAD1Q86X24 394 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 TCAIMQ8N3R3 496 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 ZMIZ2Q8NF64 920 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 OR10A6Q8NH74 314 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 SLC7A6Q92536 515 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 SNAPC3Q92966 411 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 MRGPRX2Q96LB1 330 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 ROGDIQ9GZN7 287 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 IKZF5Q9H5V7 419 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 SYTL2Q9HCH5 934 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 DCAF13Q9NV06 445 aaKnown RBP9.23□□□□□ -0.93
NECAP1-201ENST00000339754 RABL2BQ9UNT1 228 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 GMPPBQ9Y5P6 360 aa9.23□□□□□ -0.93
NECAP1-201ENST00000339754 CXCR6O00574 342 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 ANKRD28O15084 1053 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 TMCC2O75069 709 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 ZNF780AO75290 641 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-201ENST00000339754 BEST1O76090 585 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 IL7P13232 177 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 ARF4P18085 180 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-201ENST00000339754 HOXA9P31269 272 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 OAZ1P54368 228 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 HMGCS2P54868 508 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 BACE1P56817 501 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 LAPTM4AQ15012 233 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 CARD16Q5EG05 197 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 HABP4Q5JVS0 413 aaKnown RBP9.22□□□□□ -0.93
NECAP1-201ENST00000339754 KDM4DQ6B0I6 523 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 ZNF549Q6P9A3 640 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 TRAF7Q6Q0C0 670 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 Q6ZSR9 355 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 CEP68Q76N32 757 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 TSPYL5Q86VY4 417 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-201ENST00000339754 APOBEC3FQ8IUX4 373 aaKnown RBP9.22□□□□□ -0.93
NECAP1-201ENST00000339754 RHEBL1Q8TAI7 183 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 SETD6Q8TBK2 473 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 GIPC2Q8TF65 315 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 GTF2H4Q92759 462 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 Q96MT0 163 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 NFKBIZQ9BYH8 718 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 OR51E2Q9H255 320 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 NARFLQ9H6Q4 476 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 MAGIXQ9H6Y5 334 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 ACAD9Q9H845 621 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 EVPLQ92817 2033 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 A0A096LPI6 279 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 A0A1W2PQ72 361 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 MEN1O00255 615 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 CRCPO75575 148 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 SCELO95171 688 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 RPLP0P05388 317 aaKnown RBP9.22□□□□□ -0.93
NECAP1-201ENST00000339754 FDXRP22570 491 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 CCNCP24863 283 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 C21orf33P30042 268 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-201ENST00000339754 AP2S1P53680 142 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-201ENST00000339754 GEMP55040 296 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 ZNF33AQ06730 810 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 KCTD2Q14681 263 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 KIAA0040Q15053 153 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 TIGD6Q17RP2 521 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 GPAT3Q53EU6 434 aa9.22□□□□□ -0.93
NECAP1-201ENST00000339754 CELF3Q5SZQ8 465 aaKnown RBP9.22□□□□□ -0.93
NECAP1-201ENST00000339754 RAP1GAP2Q684P5 730 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms