RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 PDIA2Q13087 525 aaKnown RBP4.76□□□□□ -1.65
MSL1-201ENST00000339569 DUSP4Q13115 394 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 ZNF177Q13360 481 aaPredicted RBP4.76□□□□□ -1.65
MSL1-201ENST00000339569 RIPK1Q13546 671 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 SKIDA1Q1XH10 827 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 GGTA1PQ4G0N0 100 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 ATG16L1Q676U5 607 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 GTF2IRD2BQ6EKJ0 949 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 UGT3A1Q6NUS8 523 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 GAREM2Q75VX8 874 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 RAB44Q7Z6P3 723 aaPredicted RBP4.76□□□□□ -1.65
MSL1-201ENST00000339569 GTF2IRD2Q86UP8 949 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 TMEM173Q86WV6 379 aaPredicted RBP4.76□□□□□ -1.65
MSL1-201ENST00000339569 FAM131BQ86XD5 332 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 KRT73Q86Y46 540 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 FBXW8Q8N3Y1 598 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 INPP5DQ92835 1189 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 WDR34Q96EX3 536 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 GABRG3Q99928 467 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 NUSAP1Q9BXS6 441 aaKnown RBP4.76□□□□□ -1.65
MSL1-201ENST00000339569 DERL2Q9GZP9 239 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 C8orf33Q9H7E9 229 aaPredicted RBP4.76□□□□□ -1.65
MSL1-201ENST00000339569 MVB12BQ9H7P6 319 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 TAS2R3Q9NYW6 316 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 SMARCAL1Q9NZC9 954 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 CTNNAL1Q9UBT7 734 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 MALT1Q9UDY8 824 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 POMT1Q9Y6A1 747 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 CFAP54Q96N23 3096 aa4.76□□□□□ -1.65
MSL1-201ENST00000339569 COL5A1P20908 1838 aaPredicted RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 TRAV34A0A0B4J273 112 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 A0A1W2PRV1 198 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 TAF4O00268 1085 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 LEFTY2O00292 366 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 FCHO1O14526 889 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 SOCS6O14544 535 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 EDF1O60869 148 aaKnown RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 NFATC1O95644 943 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 PRLP01236 227 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 PROCP04070 461 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 PRKCGP05129 697 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 TPBGLP0DKB5 382 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 IGFBP6P24592 240 aaPredicted RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 ARNTP27540 789 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 PTGER3P43115 390 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 PITX1P78337 314 aaPredicted RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 KCNJ10P78508 379 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 ARF5P84085 180 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 OCRLQ01968 901 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 MAPKAPK3Q16644 382 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 PPM1LQ5SGD2 360 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 CEP85LQ5SZL2 805 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 MSANTD1Q6ZTZ1 278 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 MED25Q71SY5 747 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 ZC3HC1Q86WB0 502 aaKnown RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 TMEM126BQ8IUX1 230 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 MFSD6LQ8IWD5 586 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 CARFQ8N187 725 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 PGBD5Q8N414 524 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 GLB1L3Q8NCI6 653 aaPredicted RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 PIH1D2Q8WWB5 315 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 DUS3LQ96G46 650 aaKnown RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 NSUN3Q9H649 340 aaKnown RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 ZMAT4Q9H898 229 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 GPR27Q9NS67 375 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 APPL1Q9UKG1 709 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 CFAP73A6NFT4 308 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 ADAM12O43184 909 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 POP4O95707 220 aaKnown RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 CXCL14O95715 111 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 ESR1P03372 595 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 CYBBP04839 570 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 SERPINF2P08697 491 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 RBP1P09455 135 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 EDN3P14138 238 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 AVPR2P30518 371 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 CORO1AP31146 461 aaKnown RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 NNMTP40261 264 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 BUD31P41223 144 aaPredicted RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 SUMO3P55854 103 aaPredicted RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 POLR2LP62875 67 aaKnown RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 XIAPP98170 497 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 RPA4Q13156 261 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 TRA2AQ13595 282 aaKnown RBP eCLIP4.75□□□□□ -1.65
MSL1-201ENST00000339569 PITRM1Q5JRX3 1037 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 GRAMD4Q6IC98 578 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 C3orf62Q6ZUJ4 267 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 RABEPKQ7Z6M1 372 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 CPLX4Q7Z7G2 160 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 DENND6BQ8NEG7 585 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 OR13J1Q8NGT2 312 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 HMGCLL1Q8TB92 370 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 IFT81Q8WYA0 676 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 KCNJ9Q92806 393 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 ATP2A3Q93084 1043 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 KTI12Q96EK9 354 aaPredicted RBP4.75□□□□□ -1.65
MSL1-201ENST00000339569 HMCESQ96FZ2 354 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 TMEM245Q9H330 911 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 NT5DC2Q9H857 520 aa4.75□□□□□ -1.65
MSL1-201ENST00000339569 GORASP2Q9H8Y8 452 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms