RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ITGALP20701 1170 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 XIAPP98170 497 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 RAPSNQ13702 412 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 RANBP10Q6VN20 620 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 RAB43Q86YS6 212 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 KATNAL2Q8IYT4 538 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 PRR7Q8TB68 274 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 HEXDCQ8WVB3 486 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 SGSM3Q96HU1 749 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 RBM41Q96IZ5 413 aaKnown RBP15.15■□□□□ 0.02
LINC01116-202ENST00000339037 FERD3LQ96RJ6 166 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 SMAD5Q99717 465 aaKnown RBP15.15■□□□□ 0.02
LINC01116-202ENST00000339037 APOL2Q9BQE5 337 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 FERMT1Q9BQL6 677 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 GORASP1Q9BQQ3 440 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 VPS37BQ9H9H4 285 aa15.15■□□□□ 0.02
LINC01116-202ENST00000339037 C17orf113A0A1B0GUU1 675 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 C2orf74A8MZ97 194 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 H7C0C1 242 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 ZNF749O43361 778 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 CRTAMO95727 393 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 HBQ1P09105 142 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 ATP1B2P14415 290 aaPredicted RBP15.14■□□□□ 0.01
LINC01116-202ENST00000339037 AGXTP21549 392 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 RBL1P28749 1068 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 OTX2P32243 289 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 ATP5OP48047 213 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 KYNUQ16719 465 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 VWA5B1Q5TIE3 1220 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 BBS12Q6ZW61 710 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 SNX20Q7Z614 316 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 MRGPREQ86SM8 312 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 AMIGO1Q86WK6 493 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 GPR135Q8IZ08 494 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 RCOR2Q8IZ40 523 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 IQCKQ8N0W5 287 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 OR52E1Q8NGJ3 308 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 OR13C4Q8NGS5 318 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 KRT35Q92764 455 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 TRAPPC9Q96Q05 1148 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 C17orf62Q9BQA9 187 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 DHRS4Q9BTZ2 278 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 HEMGNQ9BXL5 484 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 KLHL25Q9H0H3 589 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 OR52A5Q9H2C5 316 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 TFB2MQ9H5Q4 396 aaKnown RBP15.14■□□□□ 0.01
LINC01116-202ENST00000339037 C10orf88Q9H8K7 445 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 COG4Q9H9E3 785 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 AAR2Q9Y312 384 aaKnown RBP15.14■□□□□ 0.01
LINC01116-202ENST00000339037 PCDHA13Q9Y5I0 950 aa15.14■□□□□ 0.01
LINC01116-202ENST00000339037 MACROD2A1Z1Q3 448 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 APOC4-APOC2K7ER74 178 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 APOC2P02655 101 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 ALPPP05187 535 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 PVRP15151 417 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 ADRA1AP35348 466 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 HADHAP40939 763 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 CD151P48509 253 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 ZNF140P52738 457 aaPredicted RBP15.13■□□□□ 0.01
LINC01116-202ENST00000339037 TMPRSS15P98073 1019 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 OLIG2Q13516 323 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 PRPSAP1Q14558 356 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 CCDC181Q5TID7 509 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 C11orf63Q6NUN7 778 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 ZNF449Q6P9G9 518 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 CDHR3Q6ZTQ4 885 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 CLEC1AQ8NC01 280 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 N4BP2L2Q92802 583 aaPredicted RBP15.13■□□□□ 0.01
LINC01116-202ENST00000339037 IP6K3Q96PC2 410 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 NRTNQ99748 197 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 HGH1Q9BTY7 390 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 FAM96AQ9H5X1 160 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 MVB12BQ9H7P6 319 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 C5AR2Q9P296 337 aa15.13■□□□□ 0.01
LINC01116-202ENST00000339037 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.13■□□□□ 0.01
LINC01116-202ENST00000339037 CSMD1Q96PZ7 3565 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 KRT86O43790 486 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 KLF7O75840 302 aaPredicted RBP15.12■□□□□ 0.01
LINC01116-202ENST00000339037 STK10O94804 968 aaKnown RBP15.12■□□□□ 0.01
LINC01116-202ENST00000339037 PSMB4P28070 264 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 RPA4Q13156 261 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 PRKG2Q13237 762 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 GPR33Q49SQ1 333 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 ZNF385CQ66K41 422 aaPredicted RBP15.12■□□□□ 0.01
LINC01116-202ENST00000339037 SPESP1Q6UW49 350 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 MAMDC2Q7Z304 686 aaPredicted RBP15.12■□□□□ 0.01
LINC01116-202ENST00000339037 HOOK3Q86VS8 718 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 CCDC170Q8IYT3 715 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 ADGRF3Q8IZF5 1079 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 PHC3Q8NDX5 983 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 SNRNP40Q96DI7 357 aaKnown RBP15.12■□□□□ 0.01
LINC01116-202ENST00000339037 C19orf60Q96EN9 201 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 FER1L6-AS2Q96M78 137 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 C19orf43Q9BQ61 176 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 XKR8Q9H6D3 395 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 ACTR10Q9NZ32 417 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 B3GNT3Q9Y2A9 372 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 AP1M2Q9Y6Q5 423 aa15.12■□□□□ 0.01
LINC01116-202ENST00000339037 IGLV3-16A0A075B6K0 115 aa15.11■□□□□ 0.01
LINC01116-202ENST00000339037 SOWAHDA6NJG2 315 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms