RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 UCK2Q9BZX2 261 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 MEAF6Q9HAF1 191 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 MRPS17Q9Y2R5 130 aaKnown RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 INO80Q9ULG1 1556 aaPredicted RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 TCRBV9S1A1TA0A576 114 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 TTC24A2A3L6 582 aaPredicted RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 PDCD5O14737 125 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 REM1O75628 298 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 STK16O75716 305 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 IPO13O94829 963 aaKnown RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 PTX3P26022 381 aaPredicted RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 HSDL2Q6YN16 418 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 PNLDC1Q8NA58 520 aaKnown RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 ADAD1Q96M93 576 aaKnown RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 TTTY10Q9BZA0 68 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 CHRAC1Q9NRG0 131 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 PLCL2Q9UPR0 1127 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 FADS3Q9Y5Q0 445 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 TMEM150CB9EJG8 249 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 FAM227AF5H4B4 570 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 DHX15O43143 795 aaKnown RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 PKMP14618 531 aaKnown RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 INHBEP58166 350 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 RPL6Q02878 288 aaKnown RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 BNIP3Q12983 259 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 PLCZ1Q86YW0 608 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 INO80EQ8NBZ0 244 aaPredicted RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 RBM4BQ9BQ04 359 aaKnown RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 ZNF670Q9BS34 389 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 RBM4Q9BWF3 364 aaKnown RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 WDR12Q9GZL7 423 aaKnown RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 ERVW-1Q9UQF0 538 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 MAP2P11137 1827 aaKnown RBP11.6□□□□□ -0.55
SHANK2-201ENST00000338508 C2orf92A0A1B0GVN3 265 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 MUSKO15146 869 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 NUAK1O60285 661 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 GABRB2P47870 512 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 CACNG1Q06432 222 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 SEC23AQ15436 765 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 SLC29A4Q7RTT9 530 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 KLHL6Q8WZ60 621 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 RFKQ969G6 155 aa11.6□□□□□ -0.55
SHANK2-201ENST00000338508 ABCA6Q8N139 1617 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 RNF17Q9BXT8 1623 aaKnown RBP11.59□□□□□ -0.55
SHANK2-201ENST00000338508 DAPL1A0PJW8 107 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 CBFA2T3O75081 653 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 CLDN11O75508 207 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 NR1H2P55055 460 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 ADAM17P78536 824 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 LRRC32Q14392 662 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 SLC25A52Q3SY17 297 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 PRSS55Q6UWB4 352 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-201ENST00000338508 FAM83DQ9H4H8 585 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 GLOD4Q9HC38 313 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 A0A1B0GVT2 93 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 CARNS1A5YM72 827 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 ANGPTL1O95841 491 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 HCKP08631 526 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 TTKP33981 857 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 ARPC4P59998 168 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 UGCGQ16739 394 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 ARSIQ5FYB1 569 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 REP15Q6BDI9 236 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 ASB18Q6ZVZ8 466 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 SDR16C5Q8N3Y7 309 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 ZNF676Q8N7Q3 588 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 PLA2G15Q8NCC3 412 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 C12orf65Q9H3J6 166 aaKnown RBP11.59□□□□□ -0.55
SHANK2-201ENST00000338508 FBXO9Q9UK97 447 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-201ENST00000338508 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 TGFB1P01137 390 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 LAG3P18627 525 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 CA9Q16790 459 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 LAPTM4BQ86VI4 370 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 TDRPQ86YL5 185 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 ZNF565Q8N9K5 539 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 TSTD1Q8NFU3 115 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 TRPM4Q8TD43 1214 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 TCEAL3Q969E4 200 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 OR2AG1Q9H205 316 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 CARS2Q9HA77 564 aaKnown RBP11.59□□□□□ -0.55
SHANK2-201ENST00000338508 SERINC1Q9NRX5 453 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 EIF2B4Q9UI10 523 aaKnown RBP11.59□□□□□ -0.55
SHANK2-201ENST00000338508 SH3BGRL2Q9UJC5 107 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 R3HDM2Q9Y2K5 976 aaKnown RBP11.59□□□□□ -0.55
SHANK2-201ENST00000338508 IQGAP3Q86VI3 1631 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 GADD45GO95257 159 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 TACR2P21452 398 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 TNFAIP8L3Q5GJ75 292 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 TREML1Q86YW5 311 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 OR5AK3PQ8NH89 298 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 JOSD2Q8TAC2 188 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 RASSF5Q8WWW0 418 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 AP1S3Q96PC3 154 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 KCTD15Q96SI1 283 aaPredicted RBP11.59□□□□□ -0.55
SHANK2-201ENST00000338508 GSKIPQ9P0R6 139 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 hCG_1818297A0A087WSY0 165 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 GOT2P00505 430 aaKnown RBP11.59□□□□□ -0.55
SHANK2-201ENST00000338508 ALPPP05187 535 aa11.59□□□□□ -0.55
SHANK2-201ENST00000338508 MMP3P08254 477 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms