RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 C6orf52Q5T4I8 152 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 CPTPQ5TA50 214 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 GOLGA7Q7Z5G4 137 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 SFRP1Q8N474 314 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ENTPD4Q9Y227 616 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 G6PDP11413 515 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 UFM1P61960 85 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 PHC3Q8NDX5 983 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 EFCAB11Q9BUY7 163 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 CACNA2D2Q9NY47 1150 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 PSME2Q9UL46 239 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 CORO2BQ9UQ03 480 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 SAMHD1Q9Y3Z3 626 aaKnown RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ATF6P18850 670 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 HTR1BP28222 390 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 RGRP47804 291 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 NFKB2Q00653 900 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 DPY19L3Q6ZPD9 716 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ADGRG6Q86SQ4 1221 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 OFCC1Q8IZS5 231 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 LRRC58Q96CX6 371 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 DGCR14Q96DF8 476 aaKnown RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 PRICKLE1Q96MT3 831 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 HNRNPCP07910 306 aaKnown RBP eCLIP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 EPORP19235 508 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ASMTP46597 345 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 GSK3BP49841 420 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF605Q86T29 641 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 C11orf74Q86VG3 221 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ENDOVQ8N8Q3 282 aaKnown RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 PAIP1Q9H074 479 aaKnown RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 MAP3K13O43283 966 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 CTSEP14091 401 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 GABRB3P28472 473 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ACADVLP49748 655 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 HNMTP50135 292 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 MANFP55145 182 aaKnown RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 EEFSECP57772 596 aaKnown RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 DLG1Q12959 904 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 PPP1R3AQ16821 1122 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 LDLRAP1Q5SW96 308 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 C1orf52Q8N6N3 182 aaKnown RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 COL26A1Q96A83 441 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 RHBGQ9H310 441 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 SCHIP1Q9P0W5 487 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 CXCR6O00574 342 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 NR2F1P10589 423 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ETS2P15036 469 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 KRT20P35900 424 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 GRB7Q14451 532 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 MMAAQ8IVH4 418 aaKnown RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF570Q96NI8 536 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 MTERF1Q99551 399 aaKnown RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 KLF16Q9BXK1 252 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 TRBV23OR9-2A0A075B6M9 112 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 RFPL2O75678 378 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 NTSP30990 170 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 LAPTM5Q13571 262 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 OR4D1Q15615 310 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 CASP12Q6UXS9 341 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 FAM124AQ86V42 546 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 TMEM25Q86YD3 366 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF655Q8N720 491 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 SLC47A1Q96FL8 570 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 DUSP26Q9BV47 211 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 CHID1Q9BWS9 393 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 DGCR6LQ9BY27 220 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 RNF38Q9H0F5 515 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ELOVL2Q9NXB9 296 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 RNF11Q9Y3C5 154 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 TULP3O75386 442 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 HNRNPA1P09651 372 aaKnown RBP eCLIP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 AQP1P29972 269 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ADRA1AP35348 466 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 PSMD8P48556 350 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 VITQ6UXI7 678 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 CDK20Q8IZL9 346 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 GPR150Q8NGU9 434 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 OR14C36Q8NHC7 312 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 B4GALNT2Q8NHY0 566 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 CYB5D2Q8WUJ1 264 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 PROX1Q92786 737 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 TUBGCP5Q96RT8 1024 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 CCDC3Q9BQI4 270 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 IGSF5Q9NSI5 407 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 ACTR3BQ9P1U1 418 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 GMPPBQ9Y5P6 360 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 GSTM1P09488 218 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 CTSAP10619 480 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 PNLIPRP1P54315 467 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 IRAK1BP1Q5VVH5 260 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 GPR107Q5VW38 600 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 FAM91A1Q658Y4 838 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 AGTRAPQ6RW13 159 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 MDGA1Q8NFP4 955 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 FIBINQ8TAL6 211 aa6.17□□□□□ -1.42
PRKDC-202ENST00000338368 FUBP1Q96AE4 644 aaKnown RBP6.17□□□□□ -1.42
PRKDC-202ENST00000338368 EBPLQ9BY08 206 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms