RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 OR2B3O76000 313 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 TNNT1P13805 278 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 ELAVL4P26378 380 aaKnown RBP11.11□□□□□ -0.63
CSMD2-202ENST00000338325 CDKN2BP42772 138 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 PER3P56645 1201 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 TAF1AQ15573 450 aaPredicted RBP11.11□□□□□ -0.63
CSMD2-202ENST00000338325 C1orf189Q5VU69 101 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 SPESP1Q6UW49 350 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 ZC3H18Q86VM9 953 aaKnown RBP11.11□□□□□ -0.63
CSMD2-202ENST00000338325 HOOK3Q86VS8 718 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 ADGRF3Q8IZF5 1079 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 C19orf47Q8N9M1 422 aaKnown RBP11.11□□□□□ -0.63
CSMD2-202ENST00000338325 OR2Y1Q8NGV0 311 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 PROKR1Q8TCW9 393 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 GBP5Q96PP8 586 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 OR52A5Q9H2C5 316 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 MVB12BQ9H7P6 319 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 IFT80Q9P2H3 777 aaPredicted RBP11.11□□□□□ -0.63
CSMD2-202ENST00000338325 RSPH14Q9UHP6 348 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 DIDO1Q9BTC0 2240 aaKnown RBP11.11□□□□□ -0.63
CSMD2-202ENST00000338325 POLEQ07864 2286 aa11.11□□□□□ -0.63
CSMD2-202ENST00000338325 AGAP14A8MT82 685 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 CFAP99D6REC4 459 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 MASP2O00187 686 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 HNRNPRO43390 633 aaKnown RBP11.1□□□□□ -0.63
CSMD2-202ENST00000338325 AGTP01019 485 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 ATP1B2P14415 290 aaPredicted RBP11.1□□□□□ -0.63
CSMD2-202ENST00000338325 SLC1A1P43005 524 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 CD151P48509 253 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 DCDP81605 110 aaKnown RBP11.1□□□□□ -0.63
CSMD2-202ENST00000338325 XIAPP98170 497 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 TAZQ16635 292 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 CYP2A13Q16696 494 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 ASTE1Q2TB18 679 aaPredicted RBP11.1□□□□□ -0.63
CSMD2-202ENST00000338325 DEFB110Q30KQ9 67 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 KAZNQ674X7 775 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 PPP1R32Q7Z5V6 425 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 RHOT2Q8IXI1 618 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 NXPE1Q8N323 547 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 HEXDCQ8WVB3 486 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 P3H4Q92791 437 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.1□□□□□ -0.63
CSMD2-202ENST00000338325 MARVELD3Q96A59 401 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 PTERQ96BW5 349 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 QKIQ96PU8 341 aaKnown RBP eCLIP11.1□□□□□ -0.63
CSMD2-202ENST00000338325 COPS8Q99627 209 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 WDR77Q9BQA1 342 aaPredicted RBP11.1□□□□□ -0.63
CSMD2-202ENST00000338325 ANP32EQ9BTT0 268 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 HGH1Q9BTY7 390 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 FICDQ9BVA6 458 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 AP1M1Q9BXS5 423 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 XKR8Q9H6D3 395 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 ZBTB20Q9HC78 741 aaPredicted RBP11.1□□□□□ -0.63
CSMD2-202ENST00000338325 FAM60AQ9NP50 221 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 ATP13A2Q9NQ11 1180 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 TRHDEQ9UKU6 1024 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 SRPK3Q9UPE1 567 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 ENTPD4Q9Y227 616 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 CDYLQ9Y232 598 aa11.1□□□□□ -0.63
CSMD2-202ENST00000338325 C5orf60A6NFR6 353 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 E2F3O00716 465 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 ZSCAN9O15535 394 aaPredicted RBP11.09□□□□□ -0.63
CSMD2-202ENST00000338325 LRRTM2O43300 516 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 CNOT3O75175 753 aaKnown RBP11.09□□□□□ -0.63
CSMD2-202ENST00000338325 ATXN8OSP0DMR3 200 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 ITGALP20701 1170 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 GABRA4P48169 554 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 GEMP55040 296 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 AIMP2Q13155 320 aaKnown RBP11.09□□□□□ -0.63
CSMD2-202ENST00000338325 RPA4Q13156 261 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 BOP1Q14137 746 aaKnown RBP11.09□□□□□ -0.63
CSMD2-202ENST00000338325 NAA30Q147X3 362 aaPredicted RBP11.09□□□□□ -0.63
CSMD2-202ENST00000338325 SLC9A5Q14940 896 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 ZNF658BQ4V348 819 aaPredicted RBP11.09□□□□□ -0.63
CSMD2-202ENST00000338325 MRPL14Q6P1L8 145 aaKnown RBP11.09□□□□□ -0.63
CSMD2-202ENST00000338325 ZNF449Q6P9G9 518 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 TRIM73Q86UV7 250 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 KCNMB4Q86W47 210 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 PHC3Q8NDX5 983 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 OR13C4Q8NGS5 318 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 PPP4R1Q8TF05 950 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 PHF12Q96QT6 1004 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 GORASP1Q9BQQ3 440 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 CHRNA10Q9GZZ6 450 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 SPRTNQ9H040 489 aaPredicted RBP11.09□□□□□ -0.63
CSMD2-202ENST00000338325 GBA3Q9H227 469 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 VPS37BQ9H9H4 285 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 TXLNGQ9NUQ3 528 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 DHCR7Q9UBM7 475 aaKnown RBP11.09□□□□□ -0.63
CSMD2-202ENST00000338325 NOVA2Q9UNW9 492 aaKnown RBP11.09□□□□□ -0.63
CSMD2-202ENST00000338325 ICKQ9UPZ9 632 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 HYOU1Q9Y4L1 999 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 CSAG2Q9Y5P2 127 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 CSMD1Q96PZ7 3565 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 ARHGAP10A1A4S6 786 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 HACD1B0YJ81 288 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 AGPSO00116 658 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 HCRTR1O43613 425 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 SPOPO43791 374 aa11.09□□□□□ -0.63
CSMD2-202ENST00000338325 AKR1B10O60218 316 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms