RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 DNMT3AQ9Y6K1 912 aaPredicted RBP15.11■□□□□ 0.01
LIMS1-202ENST00000338045 NUMA1Q14980 2115 aa15.11■□□□□ 0.01
LIMS1-202ENST00000338045 TBC1D3DA0A087WVF3 549 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 TBC1D3IA0A087WXS9 549 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 TBC1D3EA0A087X179 549 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 TBC1D3KA0A087X1G2 549 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 TBC1D3FA6NER0 549 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-202ENST00000338045 TBC1D3LB9A6J9 549 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 H3BM21 787 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 PIP5K1BO14986 540 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 CCNT2O60583 730 aaKnown RBP15.1■□□□□ 0.01
LIMS1-202ENST00000338045 OR4F21O95013 312 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 ENO1P06733 434 aaKnown RBP15.1■□□□□ 0.01
LIMS1-202ENST00000338045 TBC1D3HP0C7X1 549 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 CHRNB1P11230 501 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 ACADMP11310 421 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 IL9P15248 144 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 GABRG2P18507 467 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 PIK3CGP48736 1102 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 ABRQ12979 859 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 KLF10Q13118 480 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 PUS10Q3MIT2 529 aaKnown RBP15.1■□□□□ 0.01
LIMS1-202ENST00000338045 TMEM198Q66K66 360 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 TBC1D3GQ6DHY5 549 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 NXNQ6DKJ4 435 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 TBC1D3CQ6IPX1 549 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 CRTC3Q6UUV7 619 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 LRRC70Q7Z2Q7 622 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 TBC1D3Q8IZP1 549 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-202ENST00000338045 OXR1Q8N573 874 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 KLK6Q92876 244 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 ITFG2Q969R8 447 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 FBXL8Q96CD0 374 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 FAM210AQ96ND0 272 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 SLC32A1Q9H598 525 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 NDRG2Q9UN36 371 aaKnown RBP15.1■□□□□ 0.01
LIMS1-202ENST00000338045 DOCK9Q9BZ29 2069 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 TCRBV21S2A2A0A5A6 115 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 PABPN1LA6NDY0 278 aaKnown RBP15.1■□□□□ 0.01
LIMS1-202ENST00000338045 PRR23AA6NEV1 266 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 C10orf142B7Z368 130 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 CATP04040 527 aaKnown RBP15.1■□□□□ 0.01
LIMS1-202ENST00000338045 MYCLP1P12525 358 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-202ENST00000338045 PRDX6P30041 224 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 IGFALSP35858 605 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 PPP2CBP62714 309 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 KCNJ2P63252 427 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 PPP2CAP67775 309 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 RPA4Q13156 261 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 NAA25Q14CX7 972 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 KIAA1324Q6UXG2 1013 aaKnown RBP15.1■□□□□ 0.01
LIMS1-202ENST00000338045 ZNF852Q6ZMS4 543 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 LRRTM4Q86VH4 590 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 KIF2BQ8N4N8 673 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 OR4F6Q8NGB9 312 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 FOXJ1Q92949 421 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 FOPNLQ96NB1 174 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 CCT7Q99832 543 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 NTMT1Q9BV86 223 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 PHPT1Q9NRX4 125 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-202ENST00000338045 MRGBPQ9NV56 204 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 TIMM22Q9Y584 194 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 OR1A2Q9Y585 309 aa15.1■□□□□ 0.01
LIMS1-202ENST00000338045 CRCPO75575 148 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 NQO1P15559 274 aaKnown RBP15.09■□□□□ 0.01
LIMS1-202ENST00000338045 EPB42P16452 691 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 EPORP19235 508 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 MAP4P27816 1152 aaKnown RBP15.09■□□□□ 0.01
LIMS1-202ENST00000338045 TPMTP51580 245 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 PRKCQQ04759 706 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 XKR7Q5GH72 579 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 DOK6Q6PKX4 331 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 Q6ZS52 159 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 TRIM69Q86WT6 500 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 KLHDC8AQ8IYD2 350 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 CCDC138Q96M89 665 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 CATSPER2Q96P56 530 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 CDK15Q96Q40 435 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 CD93Q9NPY3 652 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 USP36Q9P275 1121 aaKnown RBP15.09■□□□□ 0.01
LIMS1-202ENST00000338045 ANGPTL3Q9Y5C1 460 aa15.09■□□□□ 0.01
LIMS1-202ENST00000338045 ATP6AP2A0A1C7CYW4 349 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 KLHL33A6NCF5 533 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 CHURC1-FNTBB4DL54 471 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 VPS4BO75351 444 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 KATNA1O75449 491 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 ATP6AP2O75787 350 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 CHEK2O96017 543 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 PRR35P0CG20 571 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 ACADLP28330 430 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 CCNG1P51959 295 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 NFE2L1Q14494 772 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 PTCHD3Q3KNS1 767 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 RNF165Q6ZSG1 346 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 MILR1Q7Z6M3 343 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 AMZ2Q86W34 360 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 SYNPOQ8N3V7 929 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 CDYL2Q8N8U2 506 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 DENND6BQ8NEG7 585 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 CFAP61Q8NHU2 1237 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms