RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CFAP99D6REC4 459 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 M0R129 80 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 PRAMEF11O60813 436 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 KERAO60938 352 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 IL1BP01584 269 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 KLKB1P03952 638 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 PRDX6P30041 224 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 GANABQ14697 944 aaKnown RBP8.08□□□□□ -1.12
HPS4-201ENST00000336873 Q6ZVL8 140 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 ZCCHC7Q8N3Z6 543 aaKnown RBP8.08□□□□□ -1.12
HPS4-201ENST00000336873 SFRP1Q8N474 314 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 OR4K1Q8NGD4 311 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 CGREF1Q99674 301 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 EPB41L1Q9H4G0 881 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 TRNAU1APQ9NX07 287 aaKnown RBP8.08□□□□□ -1.12
HPS4-201ENST00000336873 SCN3BQ9NY72 215 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 SLC8A2Q9UPR5 921 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 GMPPBQ9Y5P6 360 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 TMEM247A6NEH6 219 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 IFRD1O00458 451 aaPredicted RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 TGFB1P01137 390 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 INHAP05111 366 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 RPLP2P05387 115 aaKnown RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 PABPC4LP0CB38 370 aaKnown RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 THRBP10828 461 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 NAT1P18440 290 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 CCNA2P20248 432 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 AGXTP21549 392 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 CLCN2P51788 898 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 ZNF135P52742 658 aaPredicted RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 LRP8Q14114 963 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 PTCHD3Q3KNS1 767 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 RAB41Q5JT25 222 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 NADSYN1Q6IA69 706 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 VTCN1Q7Z7D3 282 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 UMODL1-AS1Q8N2C9 162 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 TRPV3Q8NET8 790 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 DOK4Q8TEW6 326 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 MAL2Q969L2 176 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 GTPBP3Q969Y2 492 aaKnown RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 COL26A1Q96A83 441 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 NACC2Q96BF6 587 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 BRD9Q9H8M2 597 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 MRPL17Q9NRX2 175 aaKnown RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 TMEM248Q9NWD8 314 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 VAPAQ9P0L0 249 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 RAB23Q9ULC3 237 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 ITM2BQ9Y287 266 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 PER2O15055 1255 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 NADKO95544 446 aaPredicted RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 IGSF6O95976 241 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 GALTP07902 379 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 ALPPL2P10696 532 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 SLC5A2P31639 672 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 EIF2B2P49770 351 aaKnown RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 SLC16A1P53985 500 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 NUP107P57740 925 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 ST8SIA6P61647 398 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 PMS2P3Q13401 168 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 IHHQ14623 411 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 PLPP4Q5VZY2 271 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 SERPINA13PQ6UXR4 307 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 LARP4Q71RC2 724 aaKnown RBP eCLIP8.07□□□□□ -1.12
HPS4-201ENST00000336873 ERMP1Q7Z2K6 904 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 RGL4Q8IZJ4 473 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 RBFAQ8N0V3 343 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 FAM86B1Q8N7N1 296 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 ZNF614Q8N883 585 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 VANGL1Q8TAA9 524 aaPredicted RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 PTCD2Q8WV60 388 aaKnown RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 KIAA1191Q96A73 305 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 RNF31Q96EP0 1072 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 FOPNLQ96NB1 174 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 UGT2B28Q9BY64 529 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 MAGEH1Q9H213 219 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 ATP13A3Q9H7F0 1226 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 MIEF1Q9NQG6 463 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 ATXN10Q9UBB4 475 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 COQ6Q9Y2Z9 468 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 C5orf58C9J3I9 102 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 PLK4O00444 970 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 PCDH8O95206 1070 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 ASLP04424 464 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 PGRP06401 933 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 SPTBP11277 2137 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 GPC1P35052 558 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 CDH4P55283 916 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 ERVK-8P63133 956 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 TP53BP2Q13625 1128 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 HKDC1Q2TB90 917 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 ZNF284Q2VY69 593 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 R3HCC1LQ7Z5L2 792 aaKnown RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 PATL1Q86TB9 770 aaKnown RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 LRRC49Q8IUZ0 686 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 BBS7Q8IWZ6 715 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 OR7A2PQ8NGA2 310 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 ARMC5Q96C12 935 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 TOR3AQ9H497 397 aa8.07□□□□□ -1.12
HPS4-201ENST00000336873 PRKAG2Q9UGJ0 569 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms