RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 CHRNB3Q05901 458 aa17.34■□□□□ 0.37
LRCH3-201ENST00000334859 CPSF6Q16630 551 aaKnown RBP eCLIP17.34■□□□□ 0.37
LRCH3-201ENST00000334859 DEFB115Q30KQ5 88 aa17.34■□□□□ 0.37
LRCH3-201ENST00000334859 MPPE1Q53F39 396 aa17.34■□□□□ 0.37
LRCH3-201ENST00000334859 PATL1Q86TB9 770 aaKnown RBP17.34■□□□□ 0.37
LRCH3-201ENST00000334859 ALDH16A1Q8IZ83 802 aa17.34■□□□□ 0.37
LRCH3-201ENST00000334859 OR10A6Q8NH74 314 aa17.34■□□□□ 0.37
LRCH3-201ENST00000334859 GTF2H4Q92759 462 aa17.34■□□□□ 0.37
LRCH3-201ENST00000334859 ZNF583Q96ND8 569 aa17.34■□□□□ 0.37
LRCH3-201ENST00000334859 LIN28AQ9H9Z2 209 aaKnown RBP17.34■□□□□ 0.37
LRCH3-201ENST00000334859 TLR9Q9NR96 1032 aa17.34■□□□□ 0.37
LRCH3-201ENST00000334859 KCTD5Q9NXV2 234 aa17.34■□□□□ 0.37
LRCH3-201ENST00000334859 TUBA8Q9NY65 449 aaPredicted RBP17.34■□□□□ 0.37
LRCH3-201ENST00000334859 INTS6Q9UL03 887 aaKnown RBP17.34■□□□□ 0.37
LRCH3-201ENST00000334859 WDR47O94967 919 aa17.33■□□□□ 0.37
LRCH3-201ENST00000334859 PGRP06401 933 aa17.33■□□□□ 0.37
LRCH3-201ENST00000334859 ANXA5P08758 320 aa17.33■□□□□ 0.37
LRCH3-201ENST00000334859 CYP4F3Q08477 520 aa17.33■□□□□ 0.37
LRCH3-201ENST00000334859 LRRC73Q5JTD7 316 aa17.33■□□□□ 0.37
LRCH3-201ENST00000334859 USP45Q70EL2 814 aa17.33■□□□□ 0.37
LRCH3-201ENST00000334859 METTL3Q86U44 580 aaKnown RBP17.33■□□□□ 0.37
LRCH3-201ENST00000334859 RIMKLAQ8IXN7 391 aa17.33■□□□□ 0.37
LRCH3-201ENST00000334859 CBARPQ8N350 705 aaPredicted RBP17.33■□□□□ 0.37
LRCH3-201ENST00000334859 FBXO30Q8TB52 745 aa17.33■□□□□ 0.37
LRCH3-201ENST00000334859 DTNBP1Q96EV8 351 aa17.33■□□□□ 0.37
LRCH3-201ENST00000334859 COPS8Q99627 209 aa17.33■□□□□ 0.37
LRCH3-201ENST00000334859 NTMT1Q9BV86 223 aa17.33■□□□□ 0.37
LRCH3-201ENST00000334859 OCEL1Q9H607 264 aa17.33■□□□□ 0.37
LRCH3-201ENST00000334859 ZNF639Q9UID6 485 aa17.33■□□□□ 0.37
LRCH3-201ENST00000334859 ALBP02768 609 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 GJA1P17302 382 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 SNRPD1P62314 119 aaKnown RBP17.33■□□□□ 0.36
LRCH3-201ENST00000334859 PLCL1Q15111 1095 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 ATP13A5Q4VNC0 1218 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 SUSD1Q6UWL2 747 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 TRIM46Q7Z4K8 759 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 REM2Q8IYK8 340 aaPredicted RBP17.33■□□□□ 0.36
LRCH3-201ENST00000334859 HS6ST3Q8IZP7 471 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 CMTM8Q8IZV2 173 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 FAM86B1Q8N7N1 296 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 TMBIM1Q969X1 311 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 C19orf43Q9BQ61 176 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 TBCDQ9BTW9 1192 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 CFHR5Q9BXR6 569 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 IKZF5Q9H5V7 419 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 ZDHHC6Q9H6R6 413 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 RDH14Q9HBH5 336 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 ZDHHC3Q9NYG2 299 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 SPG21Q9NZD8 308 aa17.33■□□□□ 0.36
LRCH3-201ENST00000334859 MKI67P46013 3256 aaKnown RBP17.33■□□□□ 0.36
LRCH3-201ENST00000334859 PARNO95453 639 aaKnown RBP17.32■□□□□ 0.36
LRCH3-201ENST00000334859 CLDN9O95484 217 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 KRT6AP02538 564 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 KRT6BP04259 564 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 IL6P05231 212 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 SRCP12931 536 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 MTHFRP42898 656 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 KRT6CP48668 564 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 RPIAP49247 311 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 ZIK1Q3SY52 487 aaPredicted RBP17.32■□□□□ 0.36
LRCH3-201ENST00000334859 RFLNAQ6ZTI6 216 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 TPRG1Q6ZUI0 275 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 DET1Q7L5Y6 550 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 CLVS1Q8IUQ0 354 aaPredicted RBP17.32■□□□□ 0.36
LRCH3-201ENST00000334859 CLEC4FQ8N1N0 589 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 AADATQ8N5Z0 425 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 GLB1L3Q8NCI6 653 aaPredicted RBP17.32■□□□□ 0.36
LRCH3-201ENST00000334859 FIBINQ8TAL6 211 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 CCDC115Q96NT0 180 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 OR52E6Q96RD3 313 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 SMG9Q9H0W8 520 aaKnown RBP17.32■□□□□ 0.36
LRCH3-201ENST00000334859 NTN4Q9HB63 628 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 C1orf109Q9NX04 203 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 LIMD1Q9UGP4 676 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 TLE2Q04725 743 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 HSPA14Q0VDF9 509 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 CNKSR3Q6P9H4 555 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 ENPP6Q6UWR7 440 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 HTR3DQ70Z44 454 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 STK32CQ86UX6 486 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 CPXM2Q8N436 756 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 ZNF548Q8NEK5 533 aaPredicted RBP17.32■□□□□ 0.36
LRCH3-201ENST00000334859 NCLNQ969V3 563 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 SLC29A3Q9BZD2 475 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 CLMPQ9H6B4 373 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 PARVBQ9HBI1 364 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 PKD2L2Q9NZM6 624 aa17.32■□□□□ 0.36
LRCH3-201ENST00000334859 BCKDHAP12694 445 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 LHCGRP22888 699 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 CCR7P32248 378 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 ARSFP54793 590 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 B4GALNT1Q00973 533 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 SMU1Q2TAY7 513 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 GTDC1Q4AE62 458 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 SLC44A4Q53GD3 710 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 MPP7Q5T2T1 576 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 METTL2BQ6P1Q9 378 aaKnown RBP17.31■□□□□ 0.36
LRCH3-201ENST00000334859 C22orf39Q6P5X5 142 aa17.31■□□□□ 0.36
LRCH3-201ENST00000334859 UBE2R2Q712K3 238 aaPredicted RBP17.31■□□□□ 0.36
LRCH3-201ENST00000334859 USP7Q93009 1102 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms