RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PRR35P0CG20 571 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 UBL4AP11441 157 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 KCNE1P15382 129 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 AKT1P31749 480 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 EIF2DP41214 584 aaKnown RBP13.49□□□□□ -0.25
SYNE3-201ENST00000334258 LHX1P48742 406 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 MRPS15P82914 257 aaKnown RBP13.49□□□□□ -0.25
SYNE3-201ENST00000334258 LRIT3Q3SXY7 679 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 B3GNT8Q7Z7M8 397 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 GRAMD2AQ8IUY3 354 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 RTL3Q8N8U3 475 aaKnown RBP13.49□□□□□ -0.25
SYNE3-201ENST00000334258 TRPV1Q8NER1 839 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 ISG20Q96AZ6 181 aaKnown RBP13.49□□□□□ -0.25
SYNE3-201ENST00000334258 HMCESQ96FZ2 354 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 REXO4Q9GZR2 422 aaKnown RBP13.49□□□□□ -0.25
SYNE3-201ENST00000334258 AP5M1Q9H0R1 490 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 PRDM8Q9NQV8 689 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 THG1LQ9NWX6 298 aaKnown RBP13.49□□□□□ -0.25
SYNE3-201ENST00000334258 ZMYM5Q9UJ78 669 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 IPPQ9Y573 584 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 LOC285556D6RIA3 1793 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 COL1A2P08123 1366 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 MROH6A6NGR9 719 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 IRAK2O43187 625 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 LCKP06239 509 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 HOXB8P17481 243 aaPredicted RBP13.48□□□□□ -0.25
SYNE3-201ENST00000334258 ITGB6P18564 788 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 S100A5P33763 92 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 HTR6P50406 440 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 ARHGDIAP52565 204 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 TIAL1Q01085 375 aaKnown RBP eCLIP13.48□□□□□ -0.25
SYNE3-201ENST00000334258 PRKCZQ05513 592 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 CYP4F3Q08477 520 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 XKR7Q5GH72 579 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 RAB41Q5JT25 222 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 DESI1Q6ICB0 168 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 Q6ZSR9 355 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 AHSA2Q719I0 299 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 PHACTR4Q8IZ21 702 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 DPP10Q8N608 796 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 MYLPFQ96A32 169 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 FUBP1Q96AE4 644 aaKnown RBP13.48□□□□□ -0.25
SYNE3-201ENST00000334258 TXNDC15Q96J42 360 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 ZNF300Q96RE9 604 aaPredicted RBP13.48□□□□□ -0.25
SYNE3-201ENST00000334258 SLIRPQ9GZT3 109 aaKnown RBP13.48□□□□□ -0.25
SYNE3-201ENST00000334258 TRIT1Q9H3H1 467 aaKnown RBP13.48□□□□□ -0.25
SYNE3-201ENST00000334258 SP140LQ9H930 580 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 IL37Q9NZH6 218 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 TESMINQ9Y4I5 508 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 ARVCFO00192 962 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 DYRK3O43781 588 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 TSPAN3O60637 253 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 GJB3O75712 270 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 RPS17P08708 135 aaKnown RBP13.48□□□□□ -0.25
SYNE3-201ENST00000334258 RFX4Q33E94 735 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 FAM174BQ3ZCQ3 159 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 ZNF404Q494X3 552 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 GPSM1Q86YR5 675 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 ATP6V0D2Q8N8Y2 350 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 SLC13A3Q8WWT9 602 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 ATL1Q8WXF7 558 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 PSMG2Q969U7 264 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 SEMA3CQ99985 751 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 BCL7BQ9BQE9 202 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 PCTPQ9UKL6 214 aa13.48□□□□□ -0.25
SYNE3-201ENST00000334258 ZNF682O95780 498 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 SERPINA1P01009 418 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 NTRK1P04629 796 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 CNPP09543 421 aaKnown RBP13.47□□□□□ -0.25
SYNE3-201ENST00000334258 HAPLN1P10915 354 aaPredicted RBP13.47□□□□□ -0.25
SYNE3-201ENST00000334258 RYKP34925 604 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 IFITM2Q01629 132 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 PTGR1Q14914 329 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 PTPRNQ16849 979 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 SGO1Q5FBB7 561 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 BHLHA9Q7RTU4 235 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 HIPK1Q86Z02 1210 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 FAM83FQ8NEG4 500 aaPredicted RBP13.47□□□□□ -0.25
SYNE3-201ENST00000334258 HASPINQ8TF76 798 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 TRIB2Q92519 343 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 YIPF6Q96EC8 236 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 GORASP2Q9H8Y8 452 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 LOC100506127A0A0U1RQW1 187 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 ISPDA4D126 451 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 TMCC2O75069 709 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 APOA1P02647 267 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 MASP1P48740 699 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 RPL38P63173 70 aaKnown RBP13.47□□□□□ -0.25
SYNE3-201ENST00000334258 RFTN2Q52LD8 501 aaPredicted RBP13.47□□□□□ -0.25
SYNE3-201ENST00000334258 MORN1Q5T089 497 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 UBE2UQ5VVX9 321 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 C17orf99Q6UX52 265 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 USP43Q70EL4 1123 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 LIMS2Q7Z4I7 341 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 GALNT7Q86SF2 657 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 SLC38A6Q8IZM9 456 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 PSD4Q8NDX1 1056 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 MYOCQ99972 504 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 IKZF5Q9H5V7 419 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 GPBP1L1Q9HC44 474 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms