RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 INMTO95050 263 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 TRIM16O95361 564 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 PFKLP17858 780 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 GKP32189 559 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 CYP4F3Q08477 520 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 GRSF1Q12849 480 aaKnown RBP eCLIP12.08□□□□□ -0.48
VPS33B-201ENST00000333371 NR1D2Q14995 579 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 ARHGEF6Q15052 776 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 MAPKAPK3Q16644 382 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 NCLNQ969V3 563 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 FAM162AQ96A26 154 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 BARD1Q99728 777 aaKnown RBP12.08□□□□□ -0.48
VPS33B-201ENST00000333371 EGFL8Q99944 293 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 CCDC90BQ9GZT6 254 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 ACTR8Q9H981 624 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 C8orf4Q9NR00 106 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 NUDT4Q9NZJ9 180 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 TBKBP1A7MCY6 615 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 ARNTLO00327 626 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 AREL1O15033 823 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 MZF1P28698 734 aaPredicted RBP12.08□□□□□ -0.48
VPS33B-201ENST00000333371 ELAVL2Q12926 359 aaKnown RBP12.08□□□□□ -0.48
VPS33B-201ENST00000333371 C6orf141Q5SZD1 244 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 ACBD5Q5T8D3 534 aaPredicted RBP12.08□□□□□ -0.48
VPS33B-201ENST00000333371 GTF2IRD2BQ6EKJ0 949 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 GALNT5Q7Z7M9 940 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 GTF2IRD2Q86UP8 949 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 DDHD1Q8NEL9 900 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 CNIH3Q8TBE1 160 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 FUNDC2Q9BWH2 189 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 OSBPL10Q9BXB5 764 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 TM6SF2Q9BZW4 377 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 P2RY12Q9H244 342 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 MARCH5Q9NX47 278 aa12.08□□□□□ -0.48
VPS33B-201ENST00000333371 KRT87PA6NCN2 255 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 SLC38A8A6NNN8 435 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 H7C4K7 107 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 K7ERQ8 282 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 HOXA2O43364 376 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 PARNO95453 639 aaKnown RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 OCM2P0CE71 109 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 OCMP0CE72 109 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 HTR1BP28222 390 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 ALDH4A1P30038 563 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 CORO1AP31146 461 aaKnown RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 CDH4P55283 916 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 PHC1P78364 1004 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 PPP2R2BQ00005 443 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 CD300CQ08708 224 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 ITGADQ13349 1161 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 MRPL58Q14197 206 aaKnown RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 PTRHD1Q6GMV3 140 aaKnown RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 NECAB2Q7Z6G3 386 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 GALNT10Q86SR1 603 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 SDCCAG3Q96C92 435 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 COX4I2Q96KJ9 171 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 BEGAINQ9BUH8 593 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 CFHR5Q9BXR6 569 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 GPR63Q9BZJ6 419 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 PFDN4Q9NQP4 134 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 COQ6Q9Y2Z9 468 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 DHRS7Q9Y394 339 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 CXCR6O00574 342 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 PQBP1O60828 265 aaKnown RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 SEC22BO75396 215 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 GMNNO75496 209 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 NPPAP01160 153 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 ESR1P03372 595 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 ZDHHC11BP0C7U3 371 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 MYCLP1P12525 358 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 CYP4B1P13584 511 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 JAK1P23458 1154 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 ATP5C1P36542 298 aaKnown RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 PTGER3P43115 390 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 LSM3P62310 102 aaKnown RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 IL1RL1Q01638 556 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 GPR17Q13304 367 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 ZNF177Q13360 481 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 PCBP2Q15366 365 aaKnown RBP eCLIP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 MOGQ16653 247 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 NPAS4Q8IUM7 802 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 NETO1Q8TDF5 533 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 RHBDF1Q96CC6 855 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 RHNO1Q9BSD3 238 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 MRPL9Q9BYD2 267 aaKnown RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 YTHDF1Q9BYJ9 559 aaKnown RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 DPY30Q9C005 99 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 HPS4Q9NQG7 708 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 VNN3Q9NY84 501 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 SELENONQ9NZV5 590 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 IL17CQ9P0M4 197 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 DNMT3LQ9UJW3 386 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 PSME2Q9UL46 239 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 PDE10AQ9Y233 779 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 PRMT5O14744 637 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 COCHO43405 550 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 E2F6O75461 281 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 PGRP06401 933 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 OPRL1P41146 370 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms