RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 SBSNQ6UWP8 590 aa8.84□□□□□ -0.99
COPB2-201ENST00000333188 DHDDSQ86SQ9 333 aa8.84□□□□□ -0.99
COPB2-201ENST00000333188 DHFR2Q86XF0 187 aa8.84□□□□□ -0.99
COPB2-201ENST00000333188 SFRP1Q8N474 314 aa8.84□□□□□ -0.99
COPB2-201ENST00000333188 HDDC3Q8N4P3 179 aa8.84□□□□□ -0.99
COPB2-201ENST00000333188 CXorf40AQ8TE69 158 aa8.84□□□□□ -0.99
COPB2-201ENST00000333188 SMARCD2Q92925 531 aa8.84□□□□□ -0.99
COPB2-201ENST00000333188 KCTD5Q9NXV2 234 aa8.84□□□□□ -0.99
COPB2-201ENST00000333188 NDRG2Q9UN36 371 aaKnown RBP8.84□□□□□ -0.99
COPB2-201ENST00000333188 KCNK6Q9Y257 313 aa8.84□□□□□ -0.99
COPB2-201ENST00000333188 DTNAQ9Y4J8 743 aa8.84□□□□□ -0.99
COPB2-201ENST00000333188 MYO10Q9HD67 2058 aa8.83□□□□□ -1
COPB2-201ENST00000333188 TTC28Q96AY4 2481 aa8.83□□□□□ -1
COPB2-201ENST00000333188 E2F3O00716 465 aa8.83□□□□□ -1
COPB2-201ENST00000333188 FZD6O60353 706 aa8.83□□□□□ -1
COPB2-201ENST00000333188 TGFB1P01137 390 aa8.83□□□□□ -1
COPB2-201ENST00000333188 UROSP10746 265 aa8.83□□□□□ -1
COPB2-201ENST00000333188 PTGER1P34995 402 aa8.83□□□□□ -1
COPB2-201ENST00000333188 ALDH9A1P49189 494 aa8.83□□□□□ -1
COPB2-201ENST00000333188 POLR2JP52435 117 aaKnown RBP8.83□□□□□ -1
COPB2-201ENST00000333188 DNAJB13P59910 316 aa8.83□□□□□ -1
COPB2-201ENST00000333188 HTRA4P83105 476 aaPredicted RBP8.83□□□□□ -1
COPB2-201ENST00000333188 ZIK1Q3SY52 487 aaPredicted RBP8.83□□□□□ -1
COPB2-201ENST00000333188 ZNF805Q5CZA5 627 aa8.83□□□□□ -1
COPB2-201ENST00000333188 ZNF542PQ5EBM4 170 aa8.83□□□□□ -1
COPB2-201ENST00000333188 SPANXN4Q5MJ08 99 aa8.83□□□□□ -1
COPB2-201ENST00000333188 TBCELQ5QJ74 424 aa8.83□□□□□ -1
COPB2-201ENST00000333188 C6orf52Q5T4I8 152 aa8.83□□□□□ -1
COPB2-201ENST00000333188 ZNF621Q6ZSS3 439 aa8.83□□□□□ -1
COPB2-201ENST00000333188 ZNF513Q8N8E2 541 aaPredicted RBP8.83□□□□□ -1
COPB2-201ENST00000333188 GPR150Q8NGU9 434 aa8.83□□□□□ -1
COPB2-201ENST00000333188 ACTRT2Q8TDY3 377 aa8.83□□□□□ -1
COPB2-201ENST00000333188 CANT1Q8WVQ1 401 aa8.83□□□□□ -1
COPB2-201ENST00000333188 ASZ1Q8WWH4 475 aa8.83□□□□□ -1
COPB2-201ENST00000333188 ZNF707Q96C28 371 aaPredicted RBP8.83□□□□□ -1
COPB2-201ENST00000333188 KCTD14Q9BQ13 255 aaPredicted RBP8.83□□□□□ -1
COPB2-201ENST00000333188 MACROD1Q9BQ69 325 aa8.83□□□□□ -1
COPB2-201ENST00000333188 TRMOQ9BU70 441 aa8.83□□□□□ -1
COPB2-201ENST00000333188 STN1Q9H668 368 aaKnown RBP8.83□□□□□ -1
COPB2-201ENST00000333188 XKR8Q9H6D3 395 aa8.83□□□□□ -1
COPB2-201ENST00000333188 STX18Q9P2W9 335 aaKnown RBP8.83□□□□□ -1
COPB2-201ENST00000333188 GPSM3Q9Y4H4 160 aa8.83□□□□□ -1
COPB2-201ENST00000333188 ARID1BQ8NFD5 2236 aaPredicted RBP8.83□□□□□ -1
COPB2-201ENST00000333188 CROCCQ5TZA2 2017 aa8.83□□□□□ -1
COPB2-201ENST00000333188 GAPDHSO14556 408 aaPredicted RBP8.83□□□□□ -1
COPB2-201ENST00000333188 PGM3O95394 542 aa8.83□□□□□ -1
COPB2-201ENST00000333188 NFATC1O95644 943 aa8.83□□□□□ -1
COPB2-201ENST00000333188 CLIC3O95833 236 aa8.83□□□□□ -1
COPB2-201ENST00000333188 OLFM2O95897 454 aa8.83□□□□□ -1
COPB2-201ENST00000333188 SLC16A8O95907 504 aa8.83□□□□□ -1
COPB2-201ENST00000333188 ACP5P13686 325 aa8.83□□□□□ -1
COPB2-201ENST00000333188 C5orf22Q49AR2 442 aa8.83□□□□□ -1
COPB2-201ENST00000333188 SFT2D3Q587I9 215 aa8.83□□□□□ -1
COPB2-201ENST00000333188 VITQ6UXI7 678 aa8.83□□□□□ -1
COPB2-201ENST00000333188 FUNDC1Q8IVP5 155 aa8.83□□□□□ -1
COPB2-201ENST00000333188 RGL4Q8IZJ4 473 aa8.83□□□□□ -1
COPB2-201ENST00000333188 FGF14Q92915 247 aa8.83□□□□□ -1
COPB2-201ENST00000333188 ZNF184Q99676 751 aaPredicted RBP8.83□□□□□ -1
COPB2-201ENST00000333188 HTATIP2Q9BUP3 242 aa8.83□□□□□ -1
COPB2-201ENST00000333188 SOX17Q9H6I2 414 aaPredicted RBP8.83□□□□□ -1
COPB2-201ENST00000333188 HS3ST2Q9Y278 367 aa8.83□□□□□ -1
COPB2-201ENST00000333188 DOCK4Q8N1I0 1966 aa8.83□□□□□ -1
COPB2-201ENST00000333188 TRPM6Q9BX84 2022 aa8.83□□□□□ -1
COPB2-201ENST00000333188 HTRA2O43464 458 aaPredicted RBP8.82□□□□□ -1
COPB2-201ENST00000333188 SOCS5O75159 536 aa8.82□□□□□ -1
COPB2-201ENST00000333188 POP7O75817 140 aaKnown RBP8.82□□□□□ -1
COPB2-201ENST00000333188 KAT7O95251 611 aa8.82□□□□□ -1
COPB2-201ENST00000333188 CYP2A7P20853 494 aa8.82□□□□□ -1
COPB2-201ENST00000333188 PXNP49023 591 aaPredicted RBP8.82□□□□□ -1
COPB2-201ENST00000333188 SATB1Q01826 763 aa8.82□□□□□ -1
COPB2-201ENST00000333188 CNTN1Q12860 1018 aa8.82□□□□□ -1
COPB2-201ENST00000333188 ZNF77Q15935 545 aa8.82□□□□□ -1
COPB2-201ENST00000333188 LRRC23Q53EV4 343 aaPredicted RBP8.82□□□□□ -1
COPB2-201ENST00000333188 CYP20A1Q6UW02 462 aa8.82□□□□□ -1
COPB2-201ENST00000333188 LARP4Q71RC2 724 aaKnown RBP eCLIP8.82□□□□□ -1
COPB2-201ENST00000333188 RASGEF1AQ8N9B8 481 aa8.82□□□□□ -1
COPB2-201ENST00000333188 PLA2G15Q8NCC3 412 aa8.82□□□□□ -1
COPB2-201ENST00000333188 OR10A6Q8NH74 314 aa8.82□□□□□ -1
COPB2-201ENST00000333188 CYGBQ8WWM9 190 aa8.82□□□□□ -1
COPB2-201ENST00000333188 OR52E6Q96RD3 313 aa8.82□□□□□ -1
COPB2-201ENST00000333188 PKP2Q99959 881 aa8.82□□□□□ -1
COPB2-201ENST00000333188 MRPL40Q9NQ50 206 aaKnown RBP8.82□□□□□ -1
COPB2-201ENST00000333188 EIF3LQ9Y262 564 aaKnown RBP8.82□□□□□ -1
COPB2-201ENST00000333188 KLHL20Q9Y2M5 609 aa8.82□□□□□ -1
COPB2-201ENST00000333188 CACNA1IQ9P0X4 2223 aa8.82□□□□□ -1
COPB2-201ENST00000333188 WDFY4Q6ZS81 3184 aa8.82□□□□□ -1
COPB2-201ENST00000333188 H0Y858 1186 aa8.82□□□□□ -1
COPB2-201ENST00000333188 K7EPI3 171 aa8.82□□□□□ -1
COPB2-201ENST00000333188 MAP3K13O43283 966 aa8.82□□□□□ -1
COPB2-201ENST00000333188 ASGR2P07307 311 aa8.82□□□□□ -1
COPB2-201ENST00000333188 C6P13671 934 aa8.82□□□□□ -1
COPB2-201ENST00000333188 VIPR1P32241 457 aa8.82□□□□□ -1
COPB2-201ENST00000333188 TPD52P55327 224 aaPredicted RBP8.82□□□□□ -1
COPB2-201ENST00000333188 ACVR1Q04771 509 aa8.82□□□□□ -1
COPB2-201ENST00000333188 KLC1Q07866 573 aa8.82□□□□□ -1
COPB2-201ENST00000333188 LAPTM4AQ15012 233 aa8.82□□□□□ -1
COPB2-201ENST00000333188 MAPKAPK3Q16644 382 aa8.82□□□□□ -1
COPB2-201ENST00000333188 CYHR1Q6ZMK1 362 aa8.82□□□□□ -1
COPB2-201ENST00000333188 PGAM4Q8N0Y7 254 aa8.82□□□□□ -1
COPB2-201ENST00000333188 CPXM2Q8N436 756 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms