RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CTSEP14091 401 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 ACRV1P26436 265 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 EIF4HQ15056 248 aaKnown RBP15.57■□□□□ 0.08
PDGFB-201ENST00000331163 SLC9B1Q4ZJI4 515 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 AGKQ53H12 422 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 TMEM196Q5HYL7 178 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 ZBTB46Q86UZ6 589 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 LCA5Q86VQ0 697 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 ASZ1Q8WWH4 475 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 PRPF18Q99633 342 aaKnown RBP15.57■□□□□ 0.08
PDGFB-201ENST00000331163 NRTNQ99748 197 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 ADAMTS6Q9UKP5 1117 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 ANKRD6Q9Y2G4 727 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 WDFY4Q6ZS81 3184 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 SAP18O00422 153 aaKnown RBP15.57■□□□□ 0.08
PDGFB-201ENST00000331163 ATG13O75143 517 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 PRDX3P30048 256 aaKnown RBP15.57■□□□□ 0.08
PDGFB-201ENST00000331163 ACTR3P61158 418 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 NET1Q7Z628 596 aaPredicted RBP15.57■□□□□ 0.08
PDGFB-201ENST00000331163 OR52B2Q96RD2 323 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 DHRS4Q9BTZ2 278 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 IPPKQ9H8X2 491 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 SIRPGQ9P1W8 387 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 STOML2Q9UJZ1 356 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 SLC22A14Q9Y267 594 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 COMMD3-BMI1R4GMX3 469 aa15.57■□□□□ 0.08
PDGFB-201ENST00000331163 SDC3O75056 442 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 PAPSS2O95340 614 aaPredicted RBP15.56■□□□□ 0.08
PDGFB-201ENST00000331163 ESRRBO95718 433 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 CLPTM1O96005 669 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 FGF3P11487 239 aaPredicted RBP15.56■□□□□ 0.08
PDGFB-201ENST00000331163 SLC2A4P14672 509 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 CMPK2Q5EBM0 449 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 PLD3Q8IV08 490 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 VRK3Q8IV63 474 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 MZB1Q8WU39 189 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 MRGPRX3Q96LB0 322 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 FERD3LQ96RJ6 166 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 MTERF1Q99551 399 aaKnown RBP15.56■□□□□ 0.08
PDGFB-201ENST00000331163 ANXA5P08758 320 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 CISD3P0C7P0 127 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 ACTR1BP42025 376 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 ACTR1AP61163 376 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 HMGCS1Q01581 520 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 IRF8Q02556 426 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 C5orf22Q49AR2 442 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 DNAL1Q4LDG9 190 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 CTSL3PQ5NE16 218 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 ISCA2Q86U28 154 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 FNDC5Q8NAU1 212 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 SMRP1Q8NCR6 262 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 ELOVL6Q9H5J4 265 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 ZFHX2Q9C0A1 2572 aaPredicted RBP15.56■□□□□ 0.08
PDGFB-201ENST00000331163 C15orf38-AP3S2A0A0A6YYH1 394 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 OR52A4PA6NMU1 304 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 HOXC11O43248 304 aaPredicted RBP15.56■□□□□ 0.08
PDGFB-201ENST00000331163 JUNP05412 331 aaKnown RBP15.56■□□□□ 0.08
PDGFB-201ENST00000331163 PPP1R3AQ16821 1122 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 ARPINQ7Z6K5 226 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 OR52B6Q8NGF0 335 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 ZCCHC2Q9C0B9 1178 aaKnown RBP15.56■□□□□ 0.08
PDGFB-201ENST00000331163 DRC3Q9H069 523 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 LIN28AQ9H9Z2 209 aaKnown RBP15.56■□□□□ 0.08
PDGFB-201ENST00000331163 PLEKHM1Q9Y4G2 1056 aa15.56■□□□□ 0.08
PDGFB-201ENST00000331163 HEMK1Q9Y5R4 338 aaPredicted RBP15.56■□□□□ 0.08
PDGFB-201ENST00000331163 FADS2P1A8MWK0 482 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 RNGTTO60942 597 aaKnown RBP15.55■□□□□ 0.08
PDGFB-201ENST00000331163 AK4P27144 223 aaPredicted RBP15.55■□□□□ 0.08
PDGFB-201ENST00000331163 NUDT2P50583 147 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 FOLH1Q04609 750 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 TGFBIQ15582 683 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 IL17RCQ8NAC3 791 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 FRS2Q8WU20 508 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 LGR4Q9BXB1 951 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 S100A14Q9HCY8 104 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 MBNL1Q9NR56 388 aaKnown RBP15.55■□□□□ 0.08
PDGFB-201ENST00000331163 INTS10Q9NVR2 710 aaKnown RBP15.55■□□□□ 0.08
PDGFB-201ENST00000331163 DTNAQ9Y4J8 743 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 TRAF6Q9Y4K3 522 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 NR5A2O00482 541 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 CATP04040 527 aaKnown RBP15.55■□□□□ 0.08
PDGFB-201ENST00000331163 GBAP04062 536 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 SRPRAP08240 638 aaKnown RBP15.55■□□□□ 0.08
PDGFB-201ENST00000331163 SLC35G4P0C7Q5 338 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 CCR7P32248 378 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 PRKAA1Q13131 559 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 LSAMPQ13449 338 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 ZYG11AQ6WRX3 759 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 TCF12Q99081 682 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 GULP1Q9UBP9 304 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 FAF1Q9UNN5 650 aaPredicted RBP15.55■□□□□ 0.08
PDGFB-201ENST00000331163 CACNB4O00305 520 aaPredicted RBP15.55■□□□□ 0.08
PDGFB-201ENST00000331163 EIF2S1P05198 315 aaKnown RBP15.55■□□□□ 0.08
PDGFB-201ENST00000331163 ZNF8P17098 575 aaPredicted RBP15.55■□□□□ 0.08
PDGFB-201ENST00000331163 GRIA3P42263 894 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 CLCQ05315 142 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 ACAP2Q15057 778 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 SNAP47Q5SQN1 464 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 TMPRSS11BQ86T26 416 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 C12orf66Q96MD2 445 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms