RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 ARHGEF18Q6ZSZ5 1173 aa24.27■■□□□ 1.48
PPP4R4-202ENST00000328839 CLDN19Q8N6F1 224 aa24.27■■□□□ 1.48
PPP4R4-202ENST00000328839 TFGQ92734 400 aaPredicted RBP24.27■■□□□ 1.48
PPP4R4-202ENST00000328839 ACTR10Q9NZ32 417 aa24.27■■□□□ 1.48
PPP4R4-202ENST00000328839 UTP20O75691 2785 aaKnown RBP24.27■■□□□ 1.48
PPP4R4-202ENST00000328839 SEC16AO15027 2179 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 IGLV3-16A0A075B6K0 115 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 ZNF749O43361 778 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 SORBS2O94875 1100 aaKnown RBP24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 TJP3O95049 919 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 CAPN1P07384 714 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 TPH1P17752 444 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 AGXTP21549 392 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 PTPN7P35236 360 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 RAPSNQ13702 412 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 ATP1A4Q13733 1029 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 NCF4Q15080 339 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 C4orf17Q53FE4 359 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 CDHR3Q6ZTQ4 885 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 GPR135Q8IZ08 494 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 ADGRF3Q8IZF5 1079 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 C19orf43Q9BQ61 176 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 NUDT9Q9BW91 350 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 ARNT2Q9HBZ2 717 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 SLAMF7Q9NQ25 335 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 PADI2Q9Y2J8 665 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 MAP4K5Q9Y4K4 846 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 PCDHGB7Q9Y5F8 929 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 FER1L5A0AVI2 2057 aa24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 RP1L1Q8IWN7 2480 aaPredicted RBP24.26■■□□□ 1.47
PPP4R4-202ENST00000328839 ESPL1Q14674 2120 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 ICE1Q9Y2F5 2266 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 CEACAM4O75871 244 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 MSL3P1P0C860 447 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 RRADP55042 308 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 RPA4Q13156 261 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 BOP1Q14137 746 aaKnown RBP24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 POU6F1Q14863 301 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 ZNF658BQ4V348 819 aaPredicted RBP24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 PRR30Q53SZ7 412 aaPredicted RBP24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 JMJD6Q6NYC1 403 aaPredicted RBP24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 SPESP1Q6UW49 350 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 MED25Q71SY5 747 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 TRIM73Q86UV7 250 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 RAB43Q86YS6 212 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 ZBTB2Q8N680 514 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 TMEM102Q8N9M5 508 aaPredicted RBP24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 NLE1Q9NVX2 485 aaPredicted RBP24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 GPR83Q9NYM4 423 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 SMARCAL1Q9NZC9 954 aa24.25■■□□□ 1.47
PPP4R4-202ENST00000328839 TRBV5-4A0A0C4DH59 114 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 CCDC78A2IDD5 438 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 RCCD1A6NED2 376 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 HBQ1P09105 142 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 OTX2P32243 289 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 BRD3Q15059 726 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 INPP5JQ15735 1006 aaPredicted RBP24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 KYNUQ16719 465 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 DEFB110Q30KQ9 67 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 OR5AR1Q8NGP9 310 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 SGSM3Q96HU1 749 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 ALS2CR12Q96Q35 445 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 DPH2Q9BQC3 489 aaPredicted RBP24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 PIH1D1Q9NWS0 290 aaKnown RBP24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 ICKQ9UPZ9 632 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 DUSP10Q9Y6W6 482 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 PCSK5Q92824 1860 aa24.24■■□□□ 1.47
PPP4R4-202ENST00000328839 SPTBN1Q01082 2364 aaKnown RBP24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 SPTAN1Q13813 2472 aaKnown RBP24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 SOWAHDA6NJG2 315 aa24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 IPO7O95373 1038 aaKnown RBP24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 CACNG1Q06432 222 aa24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 DBN1Q16643 649 aa24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 MLIPQ5VWP3 458 aa24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 HIST2H2BCQ6DN03 193 aa24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 PIANPQ8IYJ0 282 aa24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 C19orf47Q8N9M1 422 aaKnown RBP24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 ALG3Q92685 438 aa24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 LRRC40Q9H9A6 602 aa24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 GPN3Q9UHW5 284 aaPredicted RBP24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 ASF1AQ9Y294 204 aa24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 TDRKHQ9Y2W6 561 aaKnown RBP24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 SNRNP200O75643 2136 aaKnown RBP24.23■■□□□ 1.47
PPP4R4-202ENST00000328839 H7C0S8 307 aa24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 ZNF189O75820 626 aaPredicted RBP24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 OR2B3O76000 313 aa24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 GSTM1P09488 218 aa24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 SHMT2P34897 504 aa24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 GSTM4Q03013 218 aa24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 PARP6Q2NL67 630 aa24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 C1orf189Q5VU69 101 aa24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 TAB3Q8N5C8 712 aaPredicted RBP24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 FAM71DQ8N9W8 422 aa24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 ELMO1Q92556 727 aa24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.22■■□□□ 1.473e-8■■■■■ 70.6
PPP4R4-202ENST00000328839 CDKN2AIPNLQ96HQ2 116 aa24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 CALR3Q96L12 384 aaKnown RBP24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 FAM60AQ9NP50 221 aa24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 IRAK4Q9NWZ3 460 aa24.22■■□□□ 1.47
PPP4R4-202ENST00000328839 EPN1Q9Y6I3 576 aaPredicted RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms