RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 C7orf50Q9BRJ6 194 aaKnown RBP16.21■□□□□ 0.18
SMAD3-201ENST00000327367 POLLQ9UGP5 575 aa16.21■□□□□ 0.18
SMAD3-201ENST00000327367 MATN4O95460 622 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 OPN1SWP03999 348 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 CYP3A4P08684 503 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 FOSL1P15407 271 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 CD97P48960 835 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 IFI44LQ53G44 452 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 CHSY3Q70JA7 882 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 GET4Q7L5D6 327 aaPredicted RBP16.2■□□□□ 0.18
SMAD3-201ENST00000327367 ZBTB2Q8N680 514 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 HAS1Q92839 578 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 TTTY10Q9BZA0 68 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 IMP3Q9NV31 184 aaKnown RBP16.2■□□□□ 0.18
SMAD3-201ENST00000327367 NR2E3Q9Y5X4 410 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 RPP40O75818 363 aaKnown RBP16.2■□□□□ 0.18
SMAD3-201ENST00000327367 GLDCP23378 1020 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 BACE1P56817 501 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 CHAF1BQ13112 559 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 LARS2Q15031 903 aaKnown RBP16.2■□□□□ 0.18
SMAD3-201ENST00000327367 C12orf50Q8NA57 414 aaPredicted RBP16.2■□□□□ 0.18
SMAD3-201ENST00000327367 KREMEN1Q96MU8 473 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 GLI2P10070 1586 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 PDCD5O14737 125 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 COL6A2P12110 1019 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 NR4A2P43354 598 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 AVPR1BP47901 424 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 XKP51811 444 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 PCBP2Q15366 365 aaKnown RBP eCLIP16.2■□□□□ 0.182e-6■■■■□ 25.4
SMAD3-201ENST00000327367 ARL9Q6T311 187 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 CCDC54Q8NEL0 328 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 FBXW2Q9UKT8 454 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 ENPP3O14638 875 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 FARS2O95363 451 aaKnown RBP16.2■□□□□ 0.18
SMAD3-201ENST00000327367 C22orf31O95567 290 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 TMEM17Q86X19 198 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 SDR16C5Q8N3Y7 309 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 FSTL5Q8N475 847 aaPredicted RBP16.2■□□□□ 0.18
SMAD3-201ENST00000327367 KLHL36Q8N4N3 616 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 SPATA7Q9P0W8 599 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 TRBV23OR9-2A0A075B6M9 112 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 TMEM233B4DJY2 109 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 GPR89AB7ZAQ6 455 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 DISC1C4P0D8 188 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 RP2O75695 350 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 GPR89BP0CG08 455 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 EDNRAP25101 427 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 RAB15P59190 212 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 IRAK1BP1Q5VVH5 260 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 TNFAIP8L2Q6P589 184 aaPredicted RBP16.2■□□□□ 0.18
SMAD3-201ENST00000327367 OR6C4Q8NGE1 309 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 LPPQ93052 612 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 TSNAXQ99598 290 aaKnown RBP16.2■□□□□ 0.18
SMAD3-201ENST00000327367 GLOD4Q9HC38 313 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 CFL2Q9Y281 166 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 TMX2Q9Y320 296 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 SNX10Q9Y5X0 201 aa16.2■□□□□ 0.18
SMAD3-201ENST00000327367 METTL21CQ5VZV1 264 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 TIGD4Q8IY51 512 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 CASTOR1Q8WTX7 329 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 CCDC107Q8WV48 283 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 CLP1Q92989 425 aaKnown RBP16.19■□□□□ 0.18
SMAD3-201ENST00000327367 RIPOR3Q96MK2 946 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 PLK2Q9NYY3 685 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 MAP2K4P45985 399 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 CNTN2Q02246 1040 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 NFE2L1Q14494 772 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 KLHL22Q53GT1 634 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 KRBOX4Q5JUW0 171 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 DUS1LQ6P1R4 473 aaKnown RBP16.19■□□□□ 0.18
SMAD3-201ENST00000327367 KLHL35Q6PF15 583 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 CRTC1Q6UUV9 634 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 PYROXD2Q8N2H3 581 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 CSPG4P5Q96PW8 444 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 YIPF4Q9BSR8 244 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 IL1RAPQ9NPH3 570 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 ZNF226Q9NYT6 803 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 FZD1Q9UP38 647 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 PNPLA6Q8IY17 1366 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 ADRA2BP18089 450 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 PTNP21246 168 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 OR12D2P58182 307 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 NKX2-3Q8TAU0 364 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 CH25HO95992 272 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 ACVR2AP27037 513 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 WDR4P57081 412 aaKnown RBP16.19■□□□□ 0.18
SMAD3-201ENST00000327367 TRMT10BQ6PF06 316 aaKnown RBP16.19■□□□□ 0.18
SMAD3-201ENST00000327367 DNMT3LQ9UJW3 386 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 ARHGEF5Q12774 1597 aa16.19■□□□□ 0.18
SMAD3-201ENST00000327367 A0A1B0GV50 99 aa16.18■□□□□ 0.18
SMAD3-201ENST00000327367 AHCYP23526 432 aa16.18■□□□□ 0.18
SMAD3-201ENST00000327367 SLC10A7Q0GE19 358 aa16.18■□□□□ 0.18
SMAD3-201ENST00000327367 OR52B2Q96RD2 323 aa16.18■□□□□ 0.18
SMAD3-201ENST00000327367 MTMR10Q9NXD2 777 aa16.18■□□□□ 0.18
SMAD3-201ENST00000327367 NPHP4O75161 1426 aaPredicted RBP16.18■□□□□ 0.18
SMAD3-201ENST00000327367 TLR4O00206 839 aa16.18■□□□□ 0.18
SMAD3-201ENST00000327367 PAGE1O75459 146 aa16.18■□□□□ 0.18
SMAD3-201ENST00000327367 CETPP11597 493 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms