RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 GNPDA1P46926 289 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 YAP1P46937 504 aaKnown RBP19.49■□□□□ 0.71
SOX2-201ENST00000325404 TUFMP49411 452 aaKnown RBP19.49■□□□□ 0.71
SOX2-201ENST00000325404 ZIK1Q3SY52 487 aaPredicted RBP19.49■□□□□ 0.71
SOX2-201ENST00000325404 GTF2IRD2BQ6EKJ0 949 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 GTF2IRD2Q86UP8 949 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 GPR63Q9BZJ6 419 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 CD244Q9BZW8 370 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 CLMPQ9H6B4 373 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 RDH14Q9HBH5 336 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 RHBDL2Q9NX52 303 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 STOML2Q9UJZ1 356 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 MICAL3Q7RTP6 2002 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 COCHO43405 550 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 EBLN1P0CF75 366 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 MATN1P21941 496 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 SGSHP51688 502 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 IL18R1Q13478 541 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 ZC3H12BQ5HYM0 836 aaKnown RBP19.48■□□□□ 0.71
SOX2-201ENST00000325404 PRSS55Q6UWB4 352 aaPredicted RBP19.48■□□□□ 0.71
SOX2-201ENST00000325404 SNX19Q92543 992 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 ABTB1Q969K4 478 aaPredicted RBP19.48■□□□□ 0.71
SOX2-201ENST00000325404 SLC29A3Q9BZD2 475 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 DPY30Q9C005 99 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 CIPCQ9C0C6 399 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 PAIP1Q9H074 479 aaKnown RBP19.48■□□□□ 0.71
SOX2-201ENST00000325404 NSUN3Q9H649 340 aaKnown RBP19.48■□□□□ 0.71
SOX2-201ENST00000325404 WBP1LQ9NX94 342 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 TRBV5-3A0A0A0MS03 114 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 MAP4P27816 1152 aaKnown RBP19.48■□□□□ 0.71
SOX2-201ENST00000325404 AP1S1P61966 158 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 RPL38P63173 70 aaKnown RBP19.48■□□□□ 0.71
SOX2-201ENST00000325404 C18orf21Q32NC0 220 aaPredicted RBP19.48■□□□□ 0.71
SOX2-201ENST00000325404 RFX4Q33E94 735 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 PLA2G4EQ3MJ16 856 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 C6orf141Q5SZD1 244 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 GPR149Q86SP6 731 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 ADHFE1Q8IWW8 467 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 PLPP6Q8IY26 295 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 FIG4Q92562 907 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 SLC47A1Q96FL8 570 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 MBOAT4Q96T53 435 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 NAA50Q9GZZ1 169 aaKnown RBP19.48■□□□□ 0.71
SOX2-201ENST00000325404 ACTR8Q9H981 624 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 ELOVL2Q9NXB9 296 aa19.48■□□□□ 0.71
SOX2-201ENST00000325404 TRBV5-4A0A0C4DH59 114 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 CST1P01037 141 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 PIK3CGP48736 1102 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 HNRNPFP52597 415 aaKnown RBP19.47■□□□□ 0.71
SOX2-201ENST00000325404 C21orf59P57076 290 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 CDKL4Q5MAI5 379 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 DUS1LQ6P1R4 473 aaKnown RBP19.47■□□□□ 0.71
SOX2-201ENST00000325404 SNX20Q7Z614 316 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 SERPINA9Q86WD7 417 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 MICU2Q8IYU8 434 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 TANKQ92844 425 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 EID2BQ96D98 161 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 THUMPD3Q9BV44 507 aaKnown RBP19.47■□□□□ 0.71
SOX2-201ENST00000325404 CARS2Q9HA77 564 aaKnown RBP19.47■□□□□ 0.71
SOX2-201ENST00000325404 DCAF13Q9NV06 445 aaKnown RBP19.47■□□□□ 0.71
SOX2-201ENST00000325404 CHCHD3Q9NX63 227 aaKnown RBP19.47■□□□□ 0.71
SOX2-201ENST00000325404 OPTCQ9UBM4 332 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 LIMD1Q9UGP4 676 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 FAM220BPB1ANY3 271 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 CXCR6O00574 342 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 ULK1O75385 1050 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 ERN1O75460 977 aaKnown RBP19.47■□□□□ 0.71
SOX2-201ENST00000325404 LATS1O95835 1130 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 PGRP06401 933 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 HSPA7P48741 367 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 FAM174BQ3ZCQ3 159 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 R3HCC1LQ7Z5L2 792 aaKnown RBP19.47■□□□□ 0.71
SOX2-201ENST00000325404 CALHM3Q86XJ0 350 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 MSRB3Q8IXL7 192 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 FAM9CQ8IZT9 166 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 SPARTQ8N0X7 666 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 CHDHQ8NE62 594 aaPredicted RBP19.47■□□□□ 0.71
SOX2-201ENST00000325404 FBXO22Q8NEZ5 403 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 OR10A6Q8NH74 314 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 OR5K1Q8NHB7 308 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 TRUB1Q8WWH5 349 aaKnown RBP19.47■□□□□ 0.71
SOX2-201ENST00000325404 USP7Q93009 1102 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 PLEKHA8Q96JA3 519 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.47■□□□□ 0.71
SOX2-201ENST00000325404 B3GNT3Q9Y2A9 372 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 NAALAD2Q9Y3Q0 740 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 ANGPTL3Q9Y5C1 460 aa19.47■□□□□ 0.71
SOX2-201ENST00000325404 K7EPI3 171 aa19.46■□□□□ 0.71
SOX2-201ENST00000325404 CLTBP09497 229 aa19.46■□□□□ 0.71
SOX2-201ENST00000325404 NKG7Q16617 165 aa19.46■□□□□ 0.71
SOX2-201ENST00000325404 ARMC12Q5T9G4 340 aa19.46■□□□□ 0.71
SOX2-201ENST00000325404 SLC8B1Q6J4K2 584 aa19.46■□□□□ 0.71
SOX2-201ENST00000325404 ENPP6Q6UWR7 440 aa19.46■□□□□ 0.71
SOX2-201ENST00000325404 CHST15Q7LFX5 561 aaPredicted RBP19.46■□□□□ 0.71
SOX2-201ENST00000325404 DDHD1Q8NEL9 900 aa19.46■□□□□ 0.71
SOX2-201ENST00000325404 TBC1D20Q96BZ9 403 aa19.46■□□□□ 0.71
SOX2-201ENST00000325404 RHBDF1Q96CC6 855 aa19.46■□□□□ 0.71
SOX2-201ENST00000325404 LRTM1Q9HBL6 345 aa19.46■□□□□ 0.71
SOX2-201ENST00000325404 LATS2Q9NRM7 1088 aa19.46■□□□□ 0.71
SOX2-201ENST00000325404 SLC25A37Q9NYZ2 338 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms